13 homologs were found in PanDaTox collection
for query gene Cpin_3920 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_3920  hypothetical protein  100 
 
 
190 aa  393  1e-109  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.000000593759  hitchhiker  0.00522191 
 
 
-
 
NC_007954  Sden_3009  hypothetical protein  37.78 
 
 
190 aa  139  1.9999999999999998e-32  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0375  hypothetical protein  36.57 
 
 
189 aa  132  3.9999999999999996e-30  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0683  hypothetical protein  29.19 
 
 
190 aa  111  8.000000000000001e-24  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1036  hypothetical protein  30.98 
 
 
189 aa  104  6e-22  Saccharophagus degradans 2-40  Bacteria  normal  0.0197931  normal 
 
 
-
 
NC_009952  Dshi_2454  hypothetical protein  33.71 
 
 
188 aa  103  2e-21  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.185754  normal 
 
 
-
 
NC_013037  Dfer_0676  hypothetical protein  33.99 
 
 
209 aa  98.2  7e-20  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3616  hypothetical protein  33.97 
 
 
190 aa  94.4  8e-19  Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.000199395 
 
 
-
 
NC_012918  GM21_1688  hypothetical protein  29.9 
 
 
210 aa  85.1  5e-16  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013132  Cpin_5259  hypothetical protein  32.47 
 
 
204 aa  82  0.000000000000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.542652  hitchhiker  0.000548538 
 
 
-
 
NC_010830  Aasi_1072  hypothetical protein  27.81 
 
 
193 aa  77  0.0000000000001  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.788856 
 
 
-
 
NC_011146  Gbem_2544  hypothetical protein  33.11 
 
 
155 aa  73.2  0.000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_3148  hypothetical protein  29.26 
 
 
200 aa  70.5  0.00000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.613435  n/a   
 
 
-
 
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