10 homologs were found in PanDaTox collection
for query gene GM21_1564 on replicon NC_012918
Organism: Geobacter sp. M21



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_1564  protein of unknown function DUF1555  100 
 
 
230 aa  457  9.999999999999999e-129  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2671  protein of unknown function DUF1555  93.48 
 
 
230 aa  408  1e-113  Geobacter bemidjiensis Bem  Bacteria  normal  0.985757  n/a   
 
 
-
 
NC_008228  Patl_1203  hypothetical protein  34.39 
 
 
278 aa  73.6  0.000000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0789  hypothetical protein  32.42 
 
 
280 aa  68.6  0.00000000009  Pseudoalteromonas atlantica T6c  Bacteria  decreased coverage  0.00000257398  n/a   
 
 
-
 
NC_008228  Patl_0788  hypothetical protein  34.27 
 
 
280 aa  62.8  0.000000005  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0115526  n/a   
 
 
-
 
NC_009485  BBta_1025  hypothetical protein  33.64 
 
 
239 aa  62.8  0.000000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0398824  normal 
 
 
-
 
NC_009485  BBta_7154  hypothetical protein  39.56 
 
 
2039 aa  58.2  0.0000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1800  protein of unknown function DUF1555  70 
 
 
217 aa  51.2  0.00001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2512  hypothetical protein  55.88 
 
 
188 aa  45.4  0.0008  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.777055 
 
 
-
 
NC_008609  Ppro_3557  hypothetical protein  47.92 
 
 
228 aa  43.9  0.002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0181309  n/a   
 
 
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