| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1800 |
|---|
| Symbol | |
|---|
| ID | 6781789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2083607 |
|---|
| End bp | 2084260 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642767793 |
|---|
| Product | protein of unknown function DUF1555 |
|---|
| Protein accession | YP_002138612 |
|---|
| Protein GI | 197118185 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTT TGAGAAAGGC CGTCACCTTA GCAATCACGT CTATCGTGTT TTTGGCTAGT
ATTGGCATAG CCCAGGCCAA CTTGATAGCG AACGGCAGCT TCGAGGACGG TTTCTATCCC
GGATCGACAC CATTTGTCAC AGTTGGTGCC GGCACGAACA TCATCGACGG CTGGAGTGTC
GTCGATGGCT CCATCGACTG GATCAACACC TACTGGCAAG CGAGCGAAGG GACCAAAAGT
ATCGATCTGG CCGGCAACTA CCAGCACGGA TTGATAGTAG GGACCGCGTT CGACACCGTA
GCTGGGCAGA CATACCGCGT GCAGTTCGAC ATGGCCGGCA ACCCCGACAG ACCCTATAAC
AAATCGTTGG TCAGCGTGTC GACGGGCGAG ATATTCACCA CCCATTCCTT CACCTTCGAG
CAAGCAGGCA ACACCCATCA GAACATGGGA TGGGTTACCC AATATTTCGA TTTCGTAGCG
AGCAGCGACA GCGCGGAACT CTTCTTCGGC GACATCACCA ACTCGTTGAA CCCTGACGAG
GCATGGGGAG CCGCCCTGGA CAATGTCAGG GTGGATGCCG TACCGGAGCC TTCCACCATC
TTTCTTCTTG GGGCTGGACT CGCTGGCATG TGCTTATGGC GCCGCAGAGC GTAA
|
|---|
| Protein sequence | MNTLRKAVTL AITSIVFLAS IGIAQANLIA NGSFEDGFYP GSTPFVTVGA GTNIIDGWSV
VDGSIDWINT YWQASEGTKS IDLAGNYQHG LIVGTAFDTV AGQTYRVQFD MAGNPDRPYN
KSLVSVSTGE IFTTHSFTFE QAGNTHQNMG WVTQYFDFVA SSDSAELFFG DITNSLNPDE
AWGAALDNVR VDAVPEPSTI FLLGAGLAGM CLWRRRA
|
|---|
| |