7 homologs were found in PanDaTox collection
for query gene Francci3_1760 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_1760  hypothetical protein  100 
 
 
441 aa  879    Frankia sp. CcI3  Bacteria  normal  0.50844  normal  0.257048 
 
 
-
 
NC_011662  Tmz1t_3251  hypothetical protein  31.6 
 
 
320 aa  84.3  0.000000000000004  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0892  SecC motif-containing protein  28.42 
 
 
342 aa  75.9  0.000000000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1176  SecC motif-containing protein  30.22 
 
 
359 aa  73.6  0.000000000007  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1264  SecC motif-containing protein  25.25 
 
 
336 aa  62.4  0.00000002  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00874366  hitchhiker  0.00404775 
 
 
-
 
NC_007404  Tbd_0299  hypothetical protein  29.95 
 
 
307 aa  52.4  0.00002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.112405  normal 
 
 
-
 
NC_007484  Noc_0738  hypothetical protein  29.06 
 
 
318 aa  47  0.0007  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
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