| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1176 |
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| Symbol | |
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| ID | 4922368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1359863 |
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| End bp | 1360942 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162710 |
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| Product | SecC motif-containing protein |
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| Protein accession | YP_001093305 |
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| Protein GI | 127512108 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCATCAAT CCTGTTTCGA TAGACCCATT ATCATCATCT CGGCGCCGCG ATCCGGCAGC
ACGCTACTTT TTGAACTCTT AAGCCATAGC GAATCACTCT GGACCATTGG TGGCGAGAGC
CACGCTGTAA TAGAAAAGCA CAGGCAGCTC AATATCACCG CTAAGGGATT TGCCTCCAAT
GCGCTGGATA TCAGCGACTG GGATGCGGAT ATTGACCAGC AGCTCAAGGC TGACTTCGAG
GCCGCGCTGA GGGATCATCA GGGGAAACCC TACCTGAAGA GCTTAGGACC GATCCGCTTT
CTGGAGAAAA CCCCAAAGAA CAGCCTACGT ATCGACTTTC TCGCTAAGCT CTTTCCCGAC
GCCCGCTTCA TCTATCTGGT GCGGGATCCC AAGGAAAATG TTGCCAGCAT AATGCAGGCC
TGGCGCAGCG GCCGTTTTCG CACCTACCCA GGCCTGCCCG GCTGGGGCGG CGACTGGTCA
CTCCTGCTGC CTCCGGGTTG GCAGGCGCTC AGAGGAAAGC CACTAGAACA GATCGCCAGC
TTCCAGTGGT GTCAGGCCAA CGAGCACATC ATGGCCTCGC TGGACAAGCT GCCCCAAGAG
CGCTGGCACT TAGTCAGCTA TCATGATCTG GTTGCCGATC CTAAGGGCAC CACCCAGAAG
ATAGTCGAGT TCTGCCAGCT TTCCTTAGAC GCTTCACTGG CCGAGCGAAG CGAAGGCAAG
CTGCCTCACT CACGCTACAC AGTCTCGGCC CCTAAGGCCG ATAAATGGCT GGCCAACTAT
TCGGCCATCG CCGCTATCTG GCCACAAACA CAAGCTTGTC TGCATAAGGT AAATCAGCGA
CTGGCGTCAC GAGACATCTT GCCTTTTGCA ACAGATCTAC CCTCGCCACC AGAGGACCTA
CAAACGTCGG CGTCGGTTCC AGCGTCAACT ACCCAGAACA GGGAAGAAAT CAAGCTTGAA
CAAGCAAGTC CCCAGTTAAT CGAGGGTTCG AGCACTCGCT ACCCCAATAC CGCCCGTAAC
GCCCCCTGCC CCTGCGGCTC TGCGCTGAAA TACAAGGCCT GCCACGGCAA ACTGCAATAG
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| Protein sequence | MHQSCFDRPI IIISAPRSGS TLLFELLSHS ESLWTIGGES HAVIEKHRQL NITAKGFASN
ALDISDWDAD IDQQLKADFE AALRDHQGKP YLKSLGPIRF LEKTPKNSLR IDFLAKLFPD
ARFIYLVRDP KENVASIMQA WRSGRFRTYP GLPGWGGDWS LLLPPGWQAL RGKPLEQIAS
FQWCQANEHI MASLDKLPQE RWHLVSYHDL VADPKGTTQK IVEFCQLSLD ASLAERSEGK
LPHSRYTVSA PKADKWLANY SAIAAIWPQT QACLHKVNQR LASRDILPFA TDLPSPPEDL
QTSASVPAST TQNREEIKLE QASPQLIEGS STRYPNTARN APCPCGSALK YKACHGKLQ
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