8 homologs were found in PanDaTox collection
for query gene Francci3_0272 on replicon NC_007777
Organism: Frankia sp. CcI3



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007777  Francci3_0272  hypothetical protein  100 
 
 		 218 aa  436  1e-121  Frankia sp. CcI3  Bacteria  normal  0.210928  normal  1 
 
 
-
 
NC_007777  Francci3_1015  putative DNA-binding protein  67.69 
 
 		 351 aa  226  2e-58  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3308  XRE family transcriptional regulator  38.99 
 
 		 500 aa  111  9e-24  Frankia sp. CcI3  Bacteria  normal  0.032044  normal  0.303399 
 
 
-
 
NC_007777  Francci3_1954  hypothetical protein  36.76 
 
 		 470 aa  105  4e-22  Frankia sp. CcI3  Bacteria  decreased coverage  0.0082937  normal  1 
 
 
-
 
NC_007777  Francci3_1899  hypothetical protein  36.76 
 
 		 346 aa  105  7e-22  Frankia sp. CcI3  Bacteria  normal  0.310153  normal  1 
 
 
-
 
NC_007777  Francci3_3050  hypothetical protein  32.83 
 
 		 437 aa  62.8  0.000000004  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_6759  putative HTH-type transcriptional regulator  33.17 
 
 		 427 aa  62  0.000000007  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_6286  putative HTH-type transcriptional regulator  32.89 
 
 		 472 aa  48.5  0.00008  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>