| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1015 |
|---|
| Symbol | |
|---|
| ID | 3906257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1209337 |
|---|
| End bp | 1210392 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637878348 |
|---|
| Product | putative DNA-binding protein |
|---|
| Protein accession | YP_480127 |
|---|
| Protein GI | 86739727 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACCAG CGGAGGAGGT GAGTCCGACG AGCCCGACGA ACCGACGCAC TCTCATCGGC
GGCAGCATGG CAGCAGCCGG CCTGTTCGCC ACCGCGGACA CCTCGGCGGC GATCTCCGAC
CGCATCGCCG AATCGGCTGT GGCTCCTCGC ACCCTCCGCG AGATCGAACG GGACGTGCAC
GACATCGCCG CGGCCTATAC CGCCACACCC GCGGGCCTGC TGGTGCCCCG GGTCGAAACG
GGCTGGCTCG CCGTAGAACG GCTCCTCGAC GGCCGGGTCC GCGGCCGGAC CCGCACCACC
CTGGACACCC GCGCAGGCCA GTACGCGCTC TACCTCGCGT TGACCGCTAA CGACCTCGGC
CACACCCAGG CAGCCGACAC CTACCTCGAC CTCGCCGGCC AGCACGCAGA CGAGGCCGGG
GATCGGCTCC TCGCGGACTG CGTCGCCGTG CTCGACAGTT CGTTCGCGTT CTTCCGTAAC
CAGCCGCACC GCGCCCAAGC CGTCGCCGCC GAACGGCGCC AGGACGCCCA CCCCTACGCC
CACCCCTACG CCCGGCCCAT GCTCGGCGCC TGCGAGTCCC GCGCCGCGGC CCGTGCGGGC
GATCCGGCGG CAGCCCGCCA CGCCCTCGAC GACATGTGGG CAAACCTGTG GACCGGTGGC
CCTCTGCCCG GAACGGTCGC CGTTGACGAG GATCAAGCCC TCGCCCAGAG CGCGGCGATC
CTCTCTCAAC TCGCCGATCC CGCGAGCGAG GAGCACGCCC GGCGCGCTAT CGCGGCCTAC
GCGGATTCCG GGCGTGCCGG GAACCTCGGG GGGTCATACA ACGCCCTCGC ACGCAGCTAC
CTACGCCGAC CCGAGCCGGA CCCCGAACGG GCCGCCGATG CCGCACGCTC CGCGCTGGCC
GCTGTCGGGG AACAGCGAAC GAGTTGGGTT GTCGACGTCG CCGGGCAGAT GTGGCGGCAG
ATGGACGCCC GCTGGCCCGC CCTGCCCGCA GTCCACGACC TGGGGGTACT CGTCCAGGCC
GCCGAACGGC CCGCACTTCC TCCAACCGCC ACCTGA
|
|---|
| Protein sequence | MEPAEEVSPT SPTNRRTLIG GSMAAAGLFA TADTSAAISD RIAESAVAPR TLREIERDVH
DIAAAYTATP AGLLVPRVET GWLAVERLLD GRVRGRTRTT LDTRAGQYAL YLALTANDLG
HTQAADTYLD LAGQHADEAG DRLLADCVAV LDSSFAFFRN QPHRAQAVAA ERRQDAHPYA
HPYARPMLGA CESRAAARAG DPAAARHALD DMWANLWTGG PLPGTVAVDE DQALAQSAAI
LSQLADPASE EHARRAIAAY ADSGRAGNLG GSYNALARSY LRRPEPDPER AADAARSALA
AVGEQRTSWV VDVAGQMWRQ MDARWPALPA VHDLGVLVQA AERPALPPTA T
|
|---|
| |