Gene Francci3_1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1899 
Symbol 
ID3906848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2232924 
End bp2233964 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content67% 
IMG OID637879237 
Producthypothetical protein 
Protein accessionYP_481004 
Protein GI86740604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.310153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCCGT CGCGCCGCCG TGACCTACTC GGCACCGGCA TCCTTCTTGC CGCCAGCACC 
GCCACGACTG GCGCCACCAG CCGCGCCGCG CAGATCTCCC GCGCCATCGC CGCGTCCACC
CCGGACCCCC TCAGTGTCGC CCAGCTCCAC CAGGGCATCC AACGCCTCAC CCGGATCTAC
TCCACGACAC CGCACGCGGA TCTACTCGGA CCCGTCGAAC AGGCGTGGGA CGATGCGGAA
GCCCGGTTGG AAACCAGAGT CACCGGCACC GACCGTCGCG ACCTCGAACT CCTCGCCGGC
CAATACGCCT TCTACCGTGG TCGACTCGCC TTCGACATGG GCGATGACGA CGGCGCGTTG
ACGTTCTTCG TCCTCGCCGC TCAACACGCC CAGGCAGCCG GTAACCCACT ACTTGCCGGA
TCGGTTGCCG CCATGCGCTC CGCCGTGGCC TTCTTCGCCC GCGAGTTCGA GACCGCTGCG
GACATCGCCG CCCAGGCCCA GCCGCAGGCG CACCCCTATA TCGTCCCGCT CCTCGCCTGC
GCACAGGCCC GCGCCTACGC CATCACCAGC CGCGAAGACG AAGCACTAAC CGCCTTGCGG
ACCATGAATG ATCATGTCTG GACCGGCAAC CGCCTGCCAG GACCTTCACC GATTGACGAA
GAGTCCAGCG AAGCTTTCAA TGCGGTGGTA CTCGGCTATC TCGGCAAGGG TGACGAAGCC
GAGCCACACG CCCGCGCATC GTTGGCGATG CTCAGCGGAA CCGGACGGTA CGTCAGCACC
GCCGGCACCC ATCTCGCACT CGCACGGGCC TTCATCCACC GCACCCACCC GGACCCCGAA
CAGGCAGCCA CCGCAGCAAG CGACGCCCTC ATGATCGTTG ACGGCAAGGA AGTGACCAAC
GGCCCGACCT TCAACCGGGC CGCCGGTATT TGGCGCACCC TCGCCCGCAA CGAGGAGTGG
GCACGGCTCG AACCCGTCCG CGACCTGGGC GAACAGGTCT CATCCGAGCG CCGTGCGCTC
CCAGCAGGCC CAACCATCTA G
 
Protein sequence
MSPSRRRDLL GTGILLAAST ATTGATSRAA QISRAIAAST PDPLSVAQLH QGIQRLTRIY 
STTPHADLLG PVEQAWDDAE ARLETRVTGT DRRDLELLAG QYAFYRGRLA FDMGDDDGAL
TFFVLAAQHA QAAGNPLLAG SVAAMRSAVA FFAREFETAA DIAAQAQPQA HPYIVPLLAC
AQARAYAITS REDEALTALR TMNDHVWTGN RLPGPSPIDE ESSEAFNAVV LGYLGKGDEA
EPHARASLAM LSGTGRYVST AGTHLALARA FIHRTHPDPE QAATAASDAL MIVDGKEVTN
GPTFNRAAGI WRTLARNEEW ARLEPVRDLG EQVSSERRAL PAGPTI