| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3308 |
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| Symbol | |
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| ID | 3904094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3918960 |
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| End bp | 3920462 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637880633 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_482394 |
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| Protein GI | 86741994 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.032044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.303399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGGAGG CTGAGCGGCA GCGAAACGAC ACCTTGGACG AGCTGGTGGC CCTACTCCAA
CAATTGATCA AGAAATCTGG TACCAACAGG ACGCGGCTGG CCGAGCGGAC AGGATTCCCT
CGCCAGCAAG TTTCCCGGGC AGTCAACGGC CGTGAGGTAC CATCGCCGGA CCTCGCCGAC
GCATTCGACG TCGTGTTCGG TTGCAACGGG AGGATTCGTC ACCTTCGGGA TGAGGCACAC
AGAGAGAAGC GGGCGCGACG TCTCGGCGCC GAACCGCCCC GACGGGACAA GGCGCAGCCG
TCCCCGCAAA GCAGCGTCCC GAAGGAAGGG CAGGAGTTAG GGCTACAGGC CACGCTACCC
ATCACACCGA GCCCGCTGCC TGGACGAGGA CCAAGCAACG GGCCCATAGG CGTAGGTGAC
CCAAGGGAGG CGAGAGCCAC GGACAGACGC GACGCCCTAC GCGCCATGGC GCTGGGGACC
GCGGCACTCG GCCCGGTCGC GGCGGACCTC TCCCGCAGCA TCGCCGGGGC CGACCCGGAC
CCCCTCAGTG TCGACCTAGC CGAAGCGCAT ATCCACCGCA TCGCCGCCGC CTACCGCGTC
ACTCCCCATG GCGAACTCAT GGACGCCCTC GGCCCGGAAT GGCAGAACAT CGAACGCATC
CTCGACCGCC GTGTCTCGCC GCCGGTGCGC GCTCGCCTCA CGTTGATCGC CGGACAGTAC
GCCTTCTACC TCGGTACGCT CGCCTTCGAT CTCGGCGACG ACGACACCGC ACGCAGTCTT
CTCCGGGTCG CCAGCCAACA CGCCGACGAG ACGAAACAAC TCCTGCCTGC CCGCTCTCCA
CGCCGATCCG ACGTCCTGTT GCTCGACGGA TCCGTCGCAG CGATCCGTTC CAGCGTCGCC
TACTTCAACC GCGCGTACAG CGAAGCCGCC GACATCGCCG CCCAGGCACG GGAAGGCGCC
CATCCGTTCG CCCTGCCGAT CCTCGCCGGC TGCGAGGCAC GGGCCGCGGC GCTCGCGCAC
CGACCCGACG ACGCCCGCGC CGCCTTGGCC GACATGCAAG AGCATCTTTG GGACGGCGCA
GTCATGCCCG GCCCGAACCC GGGGGACGCC GCGTTCATAC ACGGCTTCCT CGCCGTCGCG
CTCGCCCACG TCGGCGACGG TGTTCAAGCC GAGCAGCATG CCCGTGTCGG CCTGGATCTG
GAGATCGCGG CCAACCCCGA CCATTATGTG CAGATCGGCG GGAAACACAA CGCCCTCTGC
CGCGCCTACC TCCGCCGCCC CGAACCGGAT CCGGAAGCCG CCGCAGACGC CGCGCGTCAC
GCACTCCTCA CGGTGGACGG ACGACCCAAT CGGACAGTTA TCCAGCAGGC AGGCCAGATG
TGGAGACAGA TGGACGGTAA ATGGCCCGAG CTCCCCACGG TCCGTGACCT CGGCGAGATA
GTACAAACCT CCAGACGAGC CCTCGAATCC GGACCGGGAG ATCCTGCGTC CGCCTGCGCC
TGA
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| Protein sequence | MLEAERQRND TLDELVALLQ QLIKKSGTNR TRLAERTGFP RQQVSRAVNG REVPSPDLAD
AFDVVFGCNG RIRHLRDEAH REKRARRLGA EPPRRDKAQP SPQSSVPKEG QELGLQATLP
ITPSPLPGRG PSNGPIGVGD PREARATDRR DALRAMALGT AALGPVAADL SRSIAGADPD
PLSVDLAEAH IHRIAAAYRV TPHGELMDAL GPEWQNIERI LDRRVSPPVR ARLTLIAGQY
AFYLGTLAFD LGDDDTARSL LRVASQHADE TKQLLPARSP RRSDVLLLDG SVAAIRSSVA
YFNRAYSEAA DIAAQAREGA HPFALPILAG CEARAAALAH RPDDARAALA DMQEHLWDGA
VMPGPNPGDA AFIHGFLAVA LAHVGDGVQA EQHARVGLDL EIAANPDHYV QIGGKHNALC
RAYLRRPEPD PEAAADAARH ALLTVDGRPN RTVIQQAGQM WRQMDGKWPE LPTVRDLGEI
VQTSRRALES GPGDPASACA
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