21 homologs were found in PanDaTox collection
for query gene Dred_0120 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009253  Dred_0120  ECF subfamily RNA polymerase sigma-24 factor  100 
 
 
77 aa  155  2e-37  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0081  regulatory protein, LuxR  76.47 
 
 
83 aa  111  3e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.521751  n/a   
 
 
-
 
NC_007644  Moth_0090  sigma-24 (FecI-like)  70.27 
 
 
80 aa  110  7.000000000000001e-24  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00000105238  normal 
 
 
-
 
NC_011830  Dhaf_0140  RNA polymerase, sigma-24 subunit, ECF subfamily  65.38 
 
 
79 aa  94.7  4e-19  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000138834  n/a   
 
 
-
 
NC_013385  Adeg_2065  transcriptional regulator, LuxR family  58.67 
 
 
82 aa  88.6  3e-17  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0087  sigma-24 (FecI-like)  73.53 
 
 
38 aa  55.5  0.0000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  42.42 
 
 
232 aa  46.2  0.0002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  52.27 
 
 
225 aa  44.3  0.0005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
BN001306  ANIA_03048  conserved hypothetical protein  35.19 
 
 
390 aa  44.3  0.0006  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.961874 
 
 
-
 
BN001308  ANIA_00263  conserved hypothetical protein  35.19 
 
 
381 aa  44.3  0.0006  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.461666  normal  0.0103312 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  50 
 
 
224 aa  43.5  0.001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
BN001308  ANIA_00683  conserved hypothetical protein  41.03 
 
 
393 aa  42.4  0.002  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
BN001308  ANIA_09381  conserved hypothetical protein  41.03 
 
 
393 aa  42.4  0.002  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.389527 
 
 
-
 
BN001303  ANIA_04335  conserved hypothetical protein  41.03 
 
 
410 aa  42  0.003  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.195294  normal 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  34.21 
 
 
233 aa  42  0.003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  50 
 
 
223 aa  42  0.003  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  45.83 
 
 
221 aa  41.6  0.004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  52.38 
 
 
221 aa  41.6  0.004  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
BN001302  ANIA_08186  conserved hypothetical protein  41.03 
 
 
408 aa  41.6  0.004  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.881087  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  50 
 
 
224 aa  41.2  0.005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  47.73 
 
 
213 aa  40.4  0.008  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
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