13 homologs were found in PanDaTox collection
for query gene Dole_2544 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009943  Dole_2544  TetR family transcriptional regulator  100 
 
 		 206 aa  416  1e-116  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0158307  n/a   
 
 
-
 
NC_008048  Sala_0301  TetR family transcriptional regulator  31.63 
 
 		 207 aa  84.3  0.000000000000001  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  0.212759 
 
 
-
 
NC_009719  Plav_0361  TetR family transcriptional regulator  43.04 
 
 		 192 aa  63.9  0.000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_2669  hypothetical protein  35.24 
 
 		 196 aa  62.4  0.000000005  Caulobacter sp. K31  Bacteria  normal  0.395376  normal  1 
 
 
-
 
NC_009719  Plav_1125  TetR family transcriptional regulator  30.61 
 
 		 200 aa  60.1  0.00000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.849198  normal  1 
 
 
-
 
NC_010506  Swoo_2397  TetR family transcriptional regulator  42.11 
 
 		 194 aa  52.8  0.000004  Shewanella woodyi ATCC 51908  Bacteria  normal  0.460379  normal  0.0825777 
 
 
-
 
NC_011071  Smal_1709  transcriptional regulator, TetR family  25.66 
 
 		 203 aa  45.4  0.0005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.922562  normal  1 
 
 
-
 
NC_002977  MCA0726  TetR family transcriptional regulator  28.83 
 
 		 201 aa  45.4  0.0006  Methylococcus capsulatus str. Bath  Bacteria  normal  0.892311  n/a   
 
 
-
 
NC_008148  Rxyl_3190  TetR family transcriptional regulator  39.02 
 
 		 202 aa  45.1  0.0007  Rubrobacter xylanophilus DSM 9941  Bacteria  unclonable  0.0000000548437  n/a   
 
 
-
 
NC_008726  Mvan_0929  TetR family transcriptional regulator  33.96 
 
 		 205 aa  42.4  0.005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.99421  normal  1 
 
 
-
 
NC_013739  Cwoe_0414  regulatory protein TetR  40.91 
 
 		 231 aa  42.4  0.005  Conexibacter woesei DSM 14684  Bacteria  normal  0.580547  normal  0.438724 
 
 
-
 
NC_008391  Bamb_5460  TetR family transcriptional regulator  35.29 
 
 		 206 aa  42  0.006  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010552  BamMC406_3604  TetR family transcriptional regulator  35.29 
 
 		 204 aa  42  0.006  Burkholderia ambifaria MC40-6  Bacteria  normal  0.657199  normal  1 
 
 
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