8 homologs were found in PanDaTox collection
for query gene Cpin_4959 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_4959  hypothetical protein  100 
 
 
826 aa  1712    Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0521836  normal  0.194577 
 
 
-
 
NC_013517  Sterm_3233  hypothetical protein  22.03 
 
 
884 aa  65.5  0.000000004  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3164  hypothetical protein  30.89 
 
 
1120 aa  48.9  0.0004  Haliangium ochraceum DSM 14365  Bacteria  normal  0.875829  normal 
 
 
-
 
NC_007413  Ava_3974  hypothetical protein  22.92 
 
 
922 aa  48.5  0.0005  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000000192393  hitchhiker  0.00265498 
 
 
-
 
NC_013517  Sterm_3062  Vault protein inter-alpha-trypsin domain protein  28.12 
 
 
984 aa  47.4  0.001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_4001  hypothetical protein  27.66 
 
 
959 aa  47  0.001  Sebaldella termitidis ATCC 33386  Bacteria  decreased coverage  0.0000175491  n/a   
 
 
-
 
NC_013162  Coch_0295  vault protein inter-alpha-trypsin  33.33 
 
 
995 aa  46.2  0.003  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.00370516  n/a   
 
 
-
 
NC_007912  Sde_2860  hypothetical protein  28 
 
 
1066 aa  44.3  0.01  Saccharophagus degradans 2-40  Bacteria  normal  0.27882  normal 
 
 
-
 
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