| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0295 |
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| Symbol | |
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| ID | 8366701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 373934 |
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| End bp | 376921 |
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| Gene Length | 2988 bp |
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| Protein Length | 995 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644982716 |
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| Product | vault protein inter-alpha-trypsin |
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| Protein accession | YP_003140419 |
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| Protein GI | 256819140 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4676] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00370516 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATCA AGCATTTTTT ATCAGCGACA GCTTTACTAC TTCCCTTACT GCTAACCGCA
CAGAAATCGG TAGTGCCAGA GGTGAAGGTA GTGAATGAGC GCAATGCCAA CCCGATGGTA
TTGCAAGACC TTTCAGTAGA TATATTAGTG GTAGGACAAA CGGCTGTTAC TACTATGGAA
ATGACCTTCT ACAACCCCAA CACCCGCGTA ATGGAAGGCG AGTTTCAGTT CCCGCTTGCC
GACGGACAGC AGGTGTCGCG CTTTGCCTTA GATATCAATG GCAAACTGCG TGAAGGTGTG
GTAGTAGACA AAGCCTTAGG GCGCAAAGCC TTTGAGGATA TTGTGCGCAG GGGTGTAGAC
CCAGGCTTAT TAGAAAAAAC TGAGGGCAAC AACTTTAAAG CACGTGTATA CCCTATGCCT
GCCAAAGGTA CTCGCCGTGT ACTCATCGCC TTTGAACAAG AACTACACGA ACGAGGCGGA
CAAGATTACT ACTTCTTGCC TATCACGGCT AACGTAACCC TTAAAAACTT CAAGGTGCGT
ACTGAGGTAG TATCACGCTT TGTAAAGGCA GATATTCAGA ACAGTCTGCA ATTAGACTTC
AAACAAGCGC GCAATAGCTA TATCAGTGAG GTAAGCAAGC AAAACTTCAC GCTCAACCAA
AACATTGCAC TTACTTTCCC GAAAATTGAG AAACCACAAA CCATTAGCGC TACCCAAGGC
AGTAAAAGCT ATTTTTATGG CAATATAGCT TTGAGCGATA CCAAAGCTAA AAGTAGCCCC
ACTCCTAAGG AAATAGGACT CTTATGGGAC GCATCGCACT CAGCAATCCA ACGCGATAGA
GCAAAAGAGT TTGCTTTCTT AGATGCTTAT TTTAAGGAAC TCAAAGACAC TAAGGTAGTG
CTTAGTACTT TTAATATTCG TTCTGCTAAA CCGCTTACTT TTGAGGTGAA AAACGGTAAT
TGGCAAGCAC TGAAATCGCA TTTAGAAAGT TTGCAATACG ATGGTGCTAC CGATGGTAAT
GCTATTGATT TCAACCTCAA AACAGATGAA ATATTACTTT TTAGCGACGG TATTTTCAAC
TTTGGCAGTA AAGAATTTTC TGTAAACGAA GTAGTGAAAC AAGCTAAAAC CCCTATAACA
GTGGTCAATG CTTCGGCAGT TGCTAATACT CCAAAAATGC AATACCTCGC CAATGCTACG
GGTGGTAACT TTATAGATTT GACAACCCTC ACTACTGAGC AAGCAATAAA AGTAGCACGC
ACTGTACCTT TCCAACTGCT AGATATAGAA GTGAAAAGCG GTAAAGTAAC CAAAATTTTC
CCGCAGAAAG GAGCTACTAT TAGCAAAGGT AATTTCACCC TTGCAGGTGA ATTGCAAAGC
GAGGAAGCAA CCTTAGTACT TAGTTTTGGT TACCCTAAAA AGGTAATGGT GCAAAAAGAA
GTAAAATTTG TAGCAAACCC CGATGCTTCT GAAAGTGAGT TCAATCTTTT GCGCCGTATA
TGGGCAGAGA AACAAATTGC ACAACTACAA CGAGAAGGTG TTGAACAAAA ACAAATAGAT
GCGGTAGGGC GTGAGTACGG CATTGTAACC GAAGGTAATT CGCTGATAGT ATTAGAAACC
GTAGAAGATT ATGTACGTTA CCGCATTACG CCTCCTACCG AATTACAGCA AGAGTACTCC
AAACGCTTAG CAAATGAGCA AAAGCAAAAA GAGGATACTG CTAAGCGTAT TTTGGATAGA
GTCGTAGAGC AATCGGAAAA GCAAAGTAAA TGGTGGCATA CCGAATATCC TGTGAAAGGC
ACTGAACCTA AGAAAAATGT TAATAACTCT AATGATACTC CTGTAAGAAT AAGAGGGGTG
GCTTCTGGGG TAGCACAAGA AGTTAGAAGT GAGGAGGTTG CTGCTATAGA AGCTGACGAA
AGTGCAGAAT TAAATGAAGT AGTTGTAGTA GGTTATTCTC CACGAAGAAA AGCAGCTATG
ACGGGAGCTA TAAATAGTAG AGTTGCTGAT TCTCCTAGTG GTAACACTAC TGCTAAAAAA
GATGTTTTTT TATCACGCAA ACCAGCAAGT CCTGTTCCTG TACCTGCCTC AAAAATAGAG
CTCAACGCCT ATAACCCCGA TACCCCTTAT TTAAAGGTAA TGGAGTATAC TGAGGAAGCA
AAAGCGGTAG AAACCTATTA CAAACTCAAA AAAGAATACG GTAACACACC TTCCTTTTAT
GTAGATGTAG CCGACTATTT CTTTAAGAAA GGTAATCGTG AGCAAGCTAT CTTGGTAGTT
TCCAATTTGG CAGAGCTCGG TTTAGACGAC CCTCAGTTGT TGCGTATGTT AGGCTACAAG
CTCAGCAACT ACAATGCTAA GAAAGAAGCG GTATGGGTAT TCCGTAAGGT GGTAACTCTG
CGTGAAGAAG AACCACAGTC TTTTCGTGAT TTGGGCTTAG CACTTGCCGA CGATGGTGCC
TATAACGAAG CCGTGAAAAA CCTTTATAAA GTAGTTACAA GCGAGTGGAG CAGTCGTTTT
GGCGATGTAC AAATCGTAAC AATGAACGAT ATCAATAGCC TCGTCGCACG CCACAAGGGT
ATAGACGTGA GTTATATCGA CAAGCGTTTG CTCAAAAAAG AACCCGTAGA TGTGCGAGTA
GTGCTCAGTT GGGATACAGA TAGCTGCGAT ATGGACTTAT GGGTAACCGA CCCCAAAGAC
GAGAAGTGTT ACTACCGAAA CACTCTTACT TACCTTGGTG GTAAAATCAC ACGTGATGTT
ACTCAAGGCT ACGGACCTGA AGAATTTATG CTCAAGAAAG CCGAAAAAGG CAAGTACAAA
GTGCAAGTGG ATTACTTTGG TACTCGCTCA CAAAAGCAAC TGATGCCTGT GAACTTGCGT
ATTACTTTCT ATACTCACTA TGGTACGCCT CAGCAAAAAC AGCAAGAAAC CACTGTACGC
CTCAGTAATG CCAAGGAGGT GATTGAAGTA GGAAGTTTTG AATTTTAA
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| Protein sequence | MRIKHFLSAT ALLLPLLLTA QKSVVPEVKV VNERNANPMV LQDLSVDILV VGQTAVTTME
MTFYNPNTRV MEGEFQFPLA DGQQVSRFAL DINGKLREGV VVDKALGRKA FEDIVRRGVD
PGLLEKTEGN NFKARVYPMP AKGTRRVLIA FEQELHERGG QDYYFLPITA NVTLKNFKVR
TEVVSRFVKA DIQNSLQLDF KQARNSYISE VSKQNFTLNQ NIALTFPKIE KPQTISATQG
SKSYFYGNIA LSDTKAKSSP TPKEIGLLWD ASHSAIQRDR AKEFAFLDAY FKELKDTKVV
LSTFNIRSAK PLTFEVKNGN WQALKSHLES LQYDGATDGN AIDFNLKTDE ILLFSDGIFN
FGSKEFSVNE VVKQAKTPIT VVNASAVANT PKMQYLANAT GGNFIDLTTL TTEQAIKVAR
TVPFQLLDIE VKSGKVTKIF PQKGATISKG NFTLAGELQS EEATLVLSFG YPKKVMVQKE
VKFVANPDAS ESEFNLLRRI WAEKQIAQLQ REGVEQKQID AVGREYGIVT EGNSLIVLET
VEDYVRYRIT PPTELQQEYS KRLANEQKQK EDTAKRILDR VVEQSEKQSK WWHTEYPVKG
TEPKKNVNNS NDTPVRIRGV ASGVAQEVRS EEVAAIEADE SAELNEVVVV GYSPRRKAAM
TGAINSRVAD SPSGNTTAKK DVFLSRKPAS PVPVPASKIE LNAYNPDTPY LKVMEYTEEA
KAVETYYKLK KEYGNTPSFY VDVADYFFKK GNREQAILVV SNLAELGLDD PQLLRMLGYK
LSNYNAKKEA VWVFRKVVTL REEEPQSFRD LGLALADDGA YNEAVKNLYK VVTSEWSSRF
GDVQIVTMND INSLVARHKG IDVSYIDKRL LKKEPVDVRV VLSWDTDSCD MDLWVTDPKD
EKCYYRNTLT YLGGKITRDV TQGYGPEEFM LKKAEKGKYK VQVDYFGTRS QKQLMPVNLR
ITFYTHYGTP QQKQQETTVR LSNAKEVIEV GSFEF
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