| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2860 |
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| Symbol | |
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| ID | 3968125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3618070 |
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| End bp | 3621270 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637921957 |
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| Product | hypothetical protein |
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| Protein accession | YP_528329 |
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| Protein GI | 90022502 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4676] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.27882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTGT TTCGATCACT TACCCTCTGT TTCATCTTAG TTAATATATT TCTAACCGCG
TCTGCATTTG CTTCGCCTAC TGCTAGTTTA TTGGGGCGTT GGGTCGGGTT TCTAGATGGA
AGTAAAATAA TCGTTCAATT TGATGAGGCA AGCAAAGGCC TAATAGAAGA AGGCCAAGGG
GCGGACTACG AAATAACCCG ATACAAATAT AAAGTAGAAG GTTCGCGTAT TATTTTTATC
GACGCCGATG ATTTTGAAGA GATGGTTGTT GATTATGCTT TAACGCCAGA TGGTTTATCG
TTAATGCCGG AAGGGGATGA AACCATCGAG CTTACTCGAA TGGCGAGTGT TAAAACGCTG
CCTTCCATAT TGGAAAATCA TGAGTGGACC GTTTTTACTA TTCCCAAGGT TGCTATTCAT
ACTGAAATTA CGGGCCGTAA TGCTAAAACA ACGGTCGAAT TGTCTGTTAC TCATGCCACC
GACCAAACCT ATGAGGCTAT GTTGCGCTTC CCTCTACCGA GTAGTGCAAC CCTTACCGCG
TATGCTTTAG ATGTGGAAGG AGTAATGATA GACAGTGTTG CGGTAGAAAA AGCACGGGCG
CGGCAAGTGT TTGAGTTGAT AGAGGACGAA AATATAGATC CTTCTTTAGT TGAGTTAACC
AATAGCAATG AACTTGCAAT AGAAATTTAC CCTATAAACC AAGGGCAACC GCGCAGCATC
CGGTTTACCT ATGTAGAGTC GCTTGAAGCG GATGAAACGG GCAGACTTAT ATATACTTTT
CCATTTGATA AGATTGGCGG TGAAGCCGAA TTGGATGTGA AAGTTGATCT GCTAGCGTCA
AATAAATTCC CAGAGCTTAA GCGCGCGCTT GGTGAGCAGC AAGATTGGAA AAAAATAAAG
CATAAGCATT TTCGCGGCTA CCGCTATACA CGCCAGCGCG ATGCAGAGAG GTTAGAAGCA
ACCTTGCCGC TAGTACTTGC CATTGCCACT AACGATAAGC GTGTAGATAT TGTAGAGCAA
GATGACTTTG GGGATCGCTA TTGGGCGACC ATTATGACTT TTTCTCGAAC GAACCTTACG
CCCATAGAGA ATGCCGAGCG TGTAACCCTT TATTGGGATA CTTCGCTATC TATGCTTGAA
AGCGAAGTGC AAAACAAGGC AATACTCGCA GAATTGCTTG CAAACGTTAA AACCAAAAAT
AGCAAAAGCA AACCGCTTGA AGTGGAAGTG GTATTGTTTG CCAACGCAAT TACAGGCTCG
CAAGTATTTG CGGTAGACGA ACAGCTAACC TCTAACGTTA CGAAATATAT AAATACTGTT
GCTTATGATG GAGCGACTAA CTTTTATCCT CTGTTCTCTA GGTTAGCAGG CTTAGATGCA
TCTTACTCCA TCATTTTTAG CGATTTCAAA CCGCAGTTCT TTAATGGTGA ATTTCAGCCT
TCTGCTAGGC CGGTGTATTG TATAACCACC ACCGCACCCA CTAACCATAG TCTGGCGAAC
AGAATAAGCA GCGCTTCTGG AGGCTTGAGT TTAAGCTCAA GGCTGTTACC TGTTTCGGAT
TTAGTTGCGT TAATTGGTAT GCGACCACCA AAAGTAGATG TTAAATTTGA AGGGCGGGGC
GGTAGTTGGA ACGCTGATAG TTTTATAAAG TGGAATATTG AAAATAAATT GTCGTTAAGC
ATAGTTTCGC AAGTGCCAGA AATAGCTAGC AAAGTGGGTG TAAGCGTAGG TAATGGTAGA
TATAAAACAC TCAATTTAAA TAAGCTGCCA TTGAAACAGG CTGGCATTGC AAAGTTCAAA
TGGCTAAGCG CTAAAATAGA CGAGCTTAAT GCCGAAGGGC CAGCAGCAAA AGAGCGTATT
GTTGCCTTGG GTGTACGGCA CAGAATTCCC ACGCCCTACA CCTCGCTATT GGTGCTTGAA
GACATTGAGC AATATGTGGA ATACGGCATT CCACCGCCCG CACAAATAGA ATATGCAGAT
AAATATGACG AGTATCGAGC GGATATAGCT GATGAAGCGC TTTCACGGGA AGATATTATT
CGCGCTCTGG AAAAGCAATG GCACAGCCGA GTACAAAGTT GGCAAAGCCA AGAGCGAAAA
ACTAAACAGG ATATTGAAAA CTGGAAGGCA ATAGAAACTA AAAAACTGTC TGCTAGCTTG
GATGACGGTG AGCTTGAAGA GGTTGTTGTT GCGGGAATTC GCGCGTCGAT GCGCACAGCT
GAAGATATAC GTAGAGACGC GGACGAAGTT GGTGGCGACC AAAGCATTAG TTTGTCGCAA
TGGAAACCCG AGGCCCCGTA TTACGCATCA TTAAATAATG CGTTGGATGC GAAAGCGAGA
TATATACAAT ATTTGACGTG GAGAGAAGAG TATCGTGCCT CGTTTAACTT TTATATGGAT
GCCGCCCAGG TGTTTATCCA GCACGGTGAG GTTGAGCAAG CAAGAAAAAT TCTTGGCAAT
GTGCTTGAAC TTGGTGAGGG GGATGATGAG GCAATAAGCC TAGCTGCGTT TAACTATTTA
CAGTTAGAAG ACTTTGATAC AGCAATATTC CTGTTTGAAG AGGTGATTAA ATTACAGCCC
TATGAGCCTT CTGCACACTT GAATTTAGCC AAGGCACAAT CTGCAAAAGC GCGTACCACT
AGGTTGCAAA CGGATTTTCA AGCCGCAGTT GATACCTTCT TATATGTTGC TTTGGGCCCC
TGGGAAGAGG ATGAACCATT ACGTATTCTC GCATTAGAGT CGTTGAATAG GCTGTTACAT
ACCACCGACT TTAAACTAAA TGTTGGTGAT TTACCTCAAT CTCTAATTGC GTATTTACCT
ATGGAGATAA GGCTCTCGCT TGCATGGAAT TCGCGTACGG CAGATATAGA CCTATGGGTG
GAAGAGCCGA CAGGTGAGCG AGTAGGCTAC AGTAATAAGC AAGGTTTTAG CGGCGGTGCA
ATTAGCGTAG ATATTACAGA TGGCTATGGT CCTGAGGTTT ATTATGCGCG CTACGCACTT
GAGGGTGAAT ACAAGGTGTA TGTCAATCTC TATGCAAATA TGTCGGCAGA GCTAACCAAA
CCGGTCACGT TAACGTTAAC GTTAACGGCC ACTACCTATT ACGGGTATGA AAAAGAAGAT
TCGCAAACGC AAAGTATGCG CGTAGAAAAA TCCGGTAGTG AAATTTATGT GGGGTCGATT
AAATTTACGC CCGCTAAGTA A
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| Protein sequence | MQVFRSLTLC FILVNIFLTA SAFASPTASL LGRWVGFLDG SKIIVQFDEA SKGLIEEGQG
ADYEITRYKY KVEGSRIIFI DADDFEEMVV DYALTPDGLS LMPEGDETIE LTRMASVKTL
PSILENHEWT VFTIPKVAIH TEITGRNAKT TVELSVTHAT DQTYEAMLRF PLPSSATLTA
YALDVEGVMI DSVAVEKARA RQVFELIEDE NIDPSLVELT NSNELAIEIY PINQGQPRSI
RFTYVESLEA DETGRLIYTF PFDKIGGEAE LDVKVDLLAS NKFPELKRAL GEQQDWKKIK
HKHFRGYRYT RQRDAERLEA TLPLVLAIAT NDKRVDIVEQ DDFGDRYWAT IMTFSRTNLT
PIENAERVTL YWDTSLSMLE SEVQNKAILA ELLANVKTKN SKSKPLEVEV VLFANAITGS
QVFAVDEQLT SNVTKYINTV AYDGATNFYP LFSRLAGLDA SYSIIFSDFK PQFFNGEFQP
SARPVYCITT TAPTNHSLAN RISSASGGLS LSSRLLPVSD LVALIGMRPP KVDVKFEGRG
GSWNADSFIK WNIENKLSLS IVSQVPEIAS KVGVSVGNGR YKTLNLNKLP LKQAGIAKFK
WLSAKIDELN AEGPAAKERI VALGVRHRIP TPYTSLLVLE DIEQYVEYGI PPPAQIEYAD
KYDEYRADIA DEALSREDII RALEKQWHSR VQSWQSQERK TKQDIENWKA IETKKLSASL
DDGELEEVVV AGIRASMRTA EDIRRDADEV GGDQSISLSQ WKPEAPYYAS LNNALDAKAR
YIQYLTWREE YRASFNFYMD AAQVFIQHGE VEQARKILGN VLELGEGDDE AISLAAFNYL
QLEDFDTAIF LFEEVIKLQP YEPSAHLNLA KAQSAKARTT RLQTDFQAAV DTFLYVALGP
WEEDEPLRIL ALESLNRLLH TTDFKLNVGD LPQSLIAYLP MEIRLSLAWN SRTADIDLWV
EEPTGERVGY SNKQGFSGGA ISVDITDGYG PEVYYARYAL EGEYKVYVNL YANMSAELTK
PVTLTLTLTA TTYYGYEKED SQTQSMRVEK SGSEIYVGSI KFTPAK
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