8 homologs were found in PanDaTox collection
for query gene Cphamn1_2478 on replicon NC_010831
Organism: Chlorobium phaeobacteroides BS1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010831  Cphamn1_2478  PGAP1 family protein  100 
 
 
465 aa  960    Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_2232  hypothetical protein  95.91 
 
 
467 aa  868    Prosthecochloris aestuarii DSM 271  Bacteria  decreased coverage  0.000103157  normal 
 
 
-
 
NC_013093  Amir_2522  Tetratricopeptide TPR_4  27.59 
 
 
958 aa  56.6  0.0000009  Actinosynnema mirum DSM 43827  Bacteria  normal  0.27051  n/a   
 
 
-
 
NC_007912  Sde_1499  hypothetical protein  34.51 
 
 
273 aa  56.2  0.000001  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00687869 
 
 
-
 
NC_013947  Snas_1657  hypothetical protein  25.42 
 
 
513 aa  48.1  0.0003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.826128  normal  0.755126 
 
 
-
 
NC_011353  ECH74115_3057  hypothetical protein  25.63 
 
 
407 aa  47.8  0.0005  Escherichia coli O157:H7 str. EC4115  Bacteria  decreased coverage  0.000245353  decreased coverage  0.000000000123111 
 
 
-
 
NC_011899  Hore_11350  PGAP1 family protein  25.57 
 
 
313 aa  44.7  0.004  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2570  hypothetical protein  27.34 
 
 
574 aa  43.5  0.008  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0686059 
 
 
-
 
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