Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_2522 |
Symbol | |
ID | 8326711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 2836290 |
End bp | 2839166 |
Gene Length | 2877 bp |
Protein Length | 958 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644943065 |
Product | Tetratricopeptide TPR_4 |
Protein accession | YP_003100306 |
Protein GI | 256376646 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.27051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCGC GGACGTCGGT GGACGTGGTC CTCATCCACG GCCTGTTCTC GTCGGGCGAG GTCTGGCGGC GGTTCGAGGA GCTGCTGCTG GCCGACCCCG AGCTCGGCGG TTCGGTTCGG TTGCACCGCT TCGACTACCC GTCGCCGAGG TTCCGCTCGC TGTGGCGCCC GGACCAGCGC GTCCCCGAGG TCGACGACAT CGCCGCCCTG CTGCGCACCC GCCTGCACGA GGAGCTGGCC GACGTGGAGC GGCTGGTGCT GGTGAGCCAC AGCCAGGGCG GCCTGGTGGT CCAGCGCTAC CTGGCGAGGG CGCTGTGGCA CGGCGAGGCG CGCCGATTAG CGCGGATCAA GCACGTGGTG CTGTTCGCCT GCCCCAACTC GGGGTCCCAG TTCGCGCTCA GCCTGCGCAG GAAGACCCGC TGGTTCCACC GCAACCCGCA GGAGGGGCAG CTGGAGCCGT TCAACCGCGC GGTGCTGGAC TCGCAGTCCA CGGTGCTCAA GGGCATCGTG CACGCCACGG ACAACACCGA CCGGACCTGG CGGGTGCCGA TCGCCGCCTA CGGCGGGCTG AGCGACAACA TCGTCCCCGC CACCACGGTG ACCTACCTGT TCCCGAAGAA CGGCGTGGTG GACGGGGACC ACTTCAGCAT CGTCCAGCCG CAGGACTCCC GATCCCCGTC GTACCAGGCG GTGCGCCGGA CGTTGACGAA GGTCCTGTCG GAGGAGCACG CCCCCGCGGT GACCGCCCCC GAGGCCGTGG TCGCCGCCCC CGAGCGCAGG CGCACCGCGG TGTCCGTGCG CCCGCCGCAC CGGGCCCGGT CGAGCCGGAT GGTGGGCCGC GACGACCTGA TGGCCGGGCT CATCTCCGAC CGGGCGCACC GGGTGCACGT GCTGTCCGGG CTCGGCGGGC TGGGCAAGAG CCGGATCGCG CTGGAGCTGG CGCACCGCGC CCAGGAGGAG GACCACCTGG TGTTCTGGGT GGAGGTCCCC CGGATCAACC TGGCGATGCG CACCATCATC AGCGGCCTCC AGCACGGGCT CGGGCAGAGC GGGACGGGGG TCGACGTCAC GCCGGACGCG CTGTGGCGGC TGCTCGACGC GCTCGACCGC CCGTGGTTGC TGGTCTTCGA CAACGCCGAC GACGTGCAGC GGCTCGCCCC GCCCGGCGTG CCGGTGGCGC AGGGGTCCGG GTGGTTGCGC GAGCCCCGCG CGGGCGGGTC GGGCCGGGTC GTCGTCACCA GCCGGGACCA GAACCCGAGG ACGTGGGGCG CTTGGTGCGG GGTGCACCAG GTGCCCCGGC TGGCACCGGA CGACGGCGCG TCGGTCCTGC GGGAGCAGGT GCCGGAAGGC GGCACGTCCG CGCAGGCCAG GGACTTGTCG GAGGCGCTGG GCGGGTTGCC GCTGGCGCTG CACGCGTGCG CGCGCTACCT GAACTCGGTG ATCAAGTCCG GTAGCGGCGG CCCGGAGCGG GGCGTGGCGG ACTTCGTGAG CTACCACGAC GCGCTGTCGC GGCGCTTCCA CTCCTCGGAC GGGCAGGACC TCGCGCTCCA GGAGGTCGGC AACGTCGTGG CGATGTCGTT GAAGCTCCTG GGCGAGCGCG GGCTGCGCTG CGCGCCCACG CTGCTGCGCC TGCTGTCGTG CCTGAACATC GCCCCCATCC CGTACGACGC GCTGCTCGGC CGGGGGCCGC TGTCCCGGTT CGCGCTGTTC AGCTCGTTCA GCGGCGCGTG CGACCAGGAC TACGGGCCGA CCCTGGACGG TCTGGCCGAC CTGGGGCTGG TCGAGCTGGA GCGGGTGGAC TCGAGCACGT CGGCCGAGCT GGGCCGGACG CTGACCATCC ACCCCCTGGT GCACCAGGAG CTGCGCAACT CCCCCGAGGT GCGGGACAGG CGCGTGGAGC ACTACGCGCT GTGCCTGCGC CTGCTGGCCG ACGTGGCTCG GGCGCACAAC CCGGACATCA CCGAGCACTG GGCGACCTGG AGCATGATCG CGCCGCACGC CGTGGACGTG ACCAGGCGCT TCCTGGTCAC CGGGCCGCCG CAGAACGACC GGGGCGCGGT GGTCGACGCG CTGGAGCTCG CCCGGCTCAC CGCGCGGTAC CTGATCGCCA GCAGCGTCGT CACGCCCGCC GAGGACCTGG TCGAGTCGCT GGTGCGCGGC TGCGCCGAGT ACGGCTTCAC CCCCGAGGAC CGGGAGCTGC TGGGGCTGCG GCACGAGCGC GGGCGGATCG CGCTGGAGCG CGGCAGGCCG GAGGACGCCG AGGCCGAGCT GCGGGCGGTG ATCGAGAGCC GGACCCGGCT GCTGGGGTTC GACCACGAGG ACACCCTGGC CAGCAGGCAC AAGCACGCGA AGGCGCTGGC CGAGCAGGGG CAGTGGGAGG AGGCCCTGCC GCTGCTGCGG GACATCGTCG ACGCCGAGCA CACCGTCCGG TCGCCCGAGC ACTACGACAC GATGGTGGTG CGGCACAGCC TGGCCCGCGT CGTGGCCGTC GACGACCCGG AGGAGGCCGC CGGGATGCTG CGGGAGATCC TGGAGATCCG CCACCGGCAC TGGGCGCGGG AAGCGCCGGA GACCCTGTCG GTGCGCCGCA CCCTGGCGAC CTGCCTGATC AGGATGGGCA AGTTCGACGA GGCCGTCACC GAGGCTGCGG GCGCCCTGGA GGTGGCCGGG GACCAGCCGA GGGCGCACGC GGTCATGGCG CTGCGGTACA CGCTCTGCCT GGCGCTGCTC GCGCGGGACG CCTCGGACCA GGACGGGCTG CACCGACAGC TGCTCGCGCT GCTCCGGGAC CAGCGCGAGG TGCTGGGCGA GGAGCACCCC GACACGGCCA GGACGAACCG GCTGGTGGCC AAGCTGAGCG GCGCGGGCTC GGGTTGA
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Protein sequence | MAARTSVDVV LIHGLFSSGE VWRRFEELLL ADPELGGSVR LHRFDYPSPR FRSLWRPDQR VPEVDDIAAL LRTRLHEELA DVERLVLVSH SQGGLVVQRY LARALWHGEA RRLARIKHVV LFACPNSGSQ FALSLRRKTR WFHRNPQEGQ LEPFNRAVLD SQSTVLKGIV HATDNTDRTW RVPIAAYGGL SDNIVPATTV TYLFPKNGVV DGDHFSIVQP QDSRSPSYQA VRRTLTKVLS EEHAPAVTAP EAVVAAPERR RTAVSVRPPH RARSSRMVGR DDLMAGLISD RAHRVHVLSG LGGLGKSRIA LELAHRAQEE DHLVFWVEVP RINLAMRTII SGLQHGLGQS GTGVDVTPDA LWRLLDALDR PWLLVFDNAD DVQRLAPPGV PVAQGSGWLR EPRAGGSGRV VVTSRDQNPR TWGAWCGVHQ VPRLAPDDGA SVLREQVPEG GTSAQARDLS EALGGLPLAL HACARYLNSV IKSGSGGPER GVADFVSYHD ALSRRFHSSD GQDLALQEVG NVVAMSLKLL GERGLRCAPT LLRLLSCLNI APIPYDALLG RGPLSRFALF SSFSGACDQD YGPTLDGLAD LGLVELERVD SSTSAELGRT LTIHPLVHQE LRNSPEVRDR RVEHYALCLR LLADVARAHN PDITEHWATW SMIAPHAVDV TRRFLVTGPP QNDRGAVVDA LELARLTARY LIASSVVTPA EDLVESLVRG CAEYGFTPED RELLGLRHER GRIALERGRP EDAEAELRAV IESRTRLLGF DHEDTLASRH KHAKALAEQG QWEEALPLLR DIVDAEHTVR SPEHYDTMVV RHSLARVVAV DDPEEAAGML REILEIRHRH WAREAPETLS VRRTLATCLI RMGKFDEAVT EAAGALEVAG DQPRAHAVMA LRYTLCLALL ARDASDQDGL HRQLLALLRD QREVLGEEHP DTARTNRLVA KLSGAGSG
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