Gene Amir_2522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_2522 
Symbol 
ID8326711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2836290 
End bp2839166 
Gene Length2877 bp 
Protein Length958 aa 
Translation table11 
GC content73% 
IMG OID644943065 
ProductTetratricopeptide TPR_4 
Protein accessionYP_003100306 
Protein GI256376646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.27051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCGC GGACGTCGGT GGACGTGGTC CTCATCCACG GCCTGTTCTC GTCGGGCGAG 
GTCTGGCGGC GGTTCGAGGA GCTGCTGCTG GCCGACCCCG AGCTCGGCGG TTCGGTTCGG
TTGCACCGCT TCGACTACCC GTCGCCGAGG TTCCGCTCGC TGTGGCGCCC GGACCAGCGC
GTCCCCGAGG TCGACGACAT CGCCGCCCTG CTGCGCACCC GCCTGCACGA GGAGCTGGCC
GACGTGGAGC GGCTGGTGCT GGTGAGCCAC AGCCAGGGCG GCCTGGTGGT CCAGCGCTAC
CTGGCGAGGG CGCTGTGGCA CGGCGAGGCG CGCCGATTAG CGCGGATCAA GCACGTGGTG
CTGTTCGCCT GCCCCAACTC GGGGTCCCAG TTCGCGCTCA GCCTGCGCAG GAAGACCCGC
TGGTTCCACC GCAACCCGCA GGAGGGGCAG CTGGAGCCGT TCAACCGCGC GGTGCTGGAC
TCGCAGTCCA CGGTGCTCAA GGGCATCGTG CACGCCACGG ACAACACCGA CCGGACCTGG
CGGGTGCCGA TCGCCGCCTA CGGCGGGCTG AGCGACAACA TCGTCCCCGC CACCACGGTG
ACCTACCTGT TCCCGAAGAA CGGCGTGGTG GACGGGGACC ACTTCAGCAT CGTCCAGCCG
CAGGACTCCC GATCCCCGTC GTACCAGGCG GTGCGCCGGA CGTTGACGAA GGTCCTGTCG
GAGGAGCACG CCCCCGCGGT GACCGCCCCC GAGGCCGTGG TCGCCGCCCC CGAGCGCAGG
CGCACCGCGG TGTCCGTGCG CCCGCCGCAC CGGGCCCGGT CGAGCCGGAT GGTGGGCCGC
GACGACCTGA TGGCCGGGCT CATCTCCGAC CGGGCGCACC GGGTGCACGT GCTGTCCGGG
CTCGGCGGGC TGGGCAAGAG CCGGATCGCG CTGGAGCTGG CGCACCGCGC CCAGGAGGAG
GACCACCTGG TGTTCTGGGT GGAGGTCCCC CGGATCAACC TGGCGATGCG CACCATCATC
AGCGGCCTCC AGCACGGGCT CGGGCAGAGC GGGACGGGGG TCGACGTCAC GCCGGACGCG
CTGTGGCGGC TGCTCGACGC GCTCGACCGC CCGTGGTTGC TGGTCTTCGA CAACGCCGAC
GACGTGCAGC GGCTCGCCCC GCCCGGCGTG CCGGTGGCGC AGGGGTCCGG GTGGTTGCGC
GAGCCCCGCG CGGGCGGGTC GGGCCGGGTC GTCGTCACCA GCCGGGACCA GAACCCGAGG
ACGTGGGGCG CTTGGTGCGG GGTGCACCAG GTGCCCCGGC TGGCACCGGA CGACGGCGCG
TCGGTCCTGC GGGAGCAGGT GCCGGAAGGC GGCACGTCCG CGCAGGCCAG GGACTTGTCG
GAGGCGCTGG GCGGGTTGCC GCTGGCGCTG CACGCGTGCG CGCGCTACCT GAACTCGGTG
ATCAAGTCCG GTAGCGGCGG CCCGGAGCGG GGCGTGGCGG ACTTCGTGAG CTACCACGAC
GCGCTGTCGC GGCGCTTCCA CTCCTCGGAC GGGCAGGACC TCGCGCTCCA GGAGGTCGGC
AACGTCGTGG CGATGTCGTT GAAGCTCCTG GGCGAGCGCG GGCTGCGCTG CGCGCCCACG
CTGCTGCGCC TGCTGTCGTG CCTGAACATC GCCCCCATCC CGTACGACGC GCTGCTCGGC
CGGGGGCCGC TGTCCCGGTT CGCGCTGTTC AGCTCGTTCA GCGGCGCGTG CGACCAGGAC
TACGGGCCGA CCCTGGACGG TCTGGCCGAC CTGGGGCTGG TCGAGCTGGA GCGGGTGGAC
TCGAGCACGT CGGCCGAGCT GGGCCGGACG CTGACCATCC ACCCCCTGGT GCACCAGGAG
CTGCGCAACT CCCCCGAGGT GCGGGACAGG CGCGTGGAGC ACTACGCGCT GTGCCTGCGC
CTGCTGGCCG ACGTGGCTCG GGCGCACAAC CCGGACATCA CCGAGCACTG GGCGACCTGG
AGCATGATCG CGCCGCACGC CGTGGACGTG ACCAGGCGCT TCCTGGTCAC CGGGCCGCCG
CAGAACGACC GGGGCGCGGT GGTCGACGCG CTGGAGCTCG CCCGGCTCAC CGCGCGGTAC
CTGATCGCCA GCAGCGTCGT CACGCCCGCC GAGGACCTGG TCGAGTCGCT GGTGCGCGGC
TGCGCCGAGT ACGGCTTCAC CCCCGAGGAC CGGGAGCTGC TGGGGCTGCG GCACGAGCGC
GGGCGGATCG CGCTGGAGCG CGGCAGGCCG GAGGACGCCG AGGCCGAGCT GCGGGCGGTG
ATCGAGAGCC GGACCCGGCT GCTGGGGTTC GACCACGAGG ACACCCTGGC CAGCAGGCAC
AAGCACGCGA AGGCGCTGGC CGAGCAGGGG CAGTGGGAGG AGGCCCTGCC GCTGCTGCGG
GACATCGTCG ACGCCGAGCA CACCGTCCGG TCGCCCGAGC ACTACGACAC GATGGTGGTG
CGGCACAGCC TGGCCCGCGT CGTGGCCGTC GACGACCCGG AGGAGGCCGC CGGGATGCTG
CGGGAGATCC TGGAGATCCG CCACCGGCAC TGGGCGCGGG AAGCGCCGGA GACCCTGTCG
GTGCGCCGCA CCCTGGCGAC CTGCCTGATC AGGATGGGCA AGTTCGACGA GGCCGTCACC
GAGGCTGCGG GCGCCCTGGA GGTGGCCGGG GACCAGCCGA GGGCGCACGC GGTCATGGCG
CTGCGGTACA CGCTCTGCCT GGCGCTGCTC GCGCGGGACG CCTCGGACCA GGACGGGCTG
CACCGACAGC TGCTCGCGCT GCTCCGGGAC CAGCGCGAGG TGCTGGGCGA GGAGCACCCC
GACACGGCCA GGACGAACCG GCTGGTGGCC AAGCTGAGCG GCGCGGGCTC GGGTTGA
 
Protein sequence
MAARTSVDVV LIHGLFSSGE VWRRFEELLL ADPELGGSVR LHRFDYPSPR FRSLWRPDQR 
VPEVDDIAAL LRTRLHEELA DVERLVLVSH SQGGLVVQRY LARALWHGEA RRLARIKHVV
LFACPNSGSQ FALSLRRKTR WFHRNPQEGQ LEPFNRAVLD SQSTVLKGIV HATDNTDRTW
RVPIAAYGGL SDNIVPATTV TYLFPKNGVV DGDHFSIVQP QDSRSPSYQA VRRTLTKVLS
EEHAPAVTAP EAVVAAPERR RTAVSVRPPH RARSSRMVGR DDLMAGLISD RAHRVHVLSG
LGGLGKSRIA LELAHRAQEE DHLVFWVEVP RINLAMRTII SGLQHGLGQS GTGVDVTPDA
LWRLLDALDR PWLLVFDNAD DVQRLAPPGV PVAQGSGWLR EPRAGGSGRV VVTSRDQNPR
TWGAWCGVHQ VPRLAPDDGA SVLREQVPEG GTSAQARDLS EALGGLPLAL HACARYLNSV
IKSGSGGPER GVADFVSYHD ALSRRFHSSD GQDLALQEVG NVVAMSLKLL GERGLRCAPT
LLRLLSCLNI APIPYDALLG RGPLSRFALF SSFSGACDQD YGPTLDGLAD LGLVELERVD
SSTSAELGRT LTIHPLVHQE LRNSPEVRDR RVEHYALCLR LLADVARAHN PDITEHWATW
SMIAPHAVDV TRRFLVTGPP QNDRGAVVDA LELARLTARY LIASSVVTPA EDLVESLVRG
CAEYGFTPED RELLGLRHER GRIALERGRP EDAEAELRAV IESRTRLLGF DHEDTLASRH
KHAKALAEQG QWEEALPLLR DIVDAEHTVR SPEHYDTMVV RHSLARVVAV DDPEEAAGML
REILEIRHRH WAREAPETLS VRRTLATCLI RMGKFDEAVT EAAGALEVAG DQPRAHAVMA
LRYTLCLALL ARDASDQDGL HRQLLALLRD QREVLGEEHP DTARTNRLVA KLSGAGSG