Gene Sde_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1499 
Symbol 
ID3965027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1932230 
End bp1933051 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content40% 
IMG OID637920577 
Producthypothetical protein 
Protein accessionYP_526973 
Protein GI90021146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00687869 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGACTC ATTTGTTGCC TAAATTACTT AAGGGCGGCA TCTCTGCAAC TGGAGAGGCG 
CGGGTCATGT TCTCGATGAA GCCCAATCGA AAAGCTATTG TGTTTATCCA TGGATTTAAT
GGGAATGCAA TTAAGACTTG GGCAGATTTT CATGAGCTCT TACCCAATTC GCCCAAAAGT
GAAGGTCGTG ATATTTATTT TTATGGCTAC GATGGTTTAA GGTCAGAATT AATAGCTAGC
GCGGCTATAT TTGGCAATTT TCTAAACCAA TTGTTTAATA ATATTACCCC AATACTAAAA
GACAATTTAT CGCAACCTGC GCAACGCTCT TCAAGCTTTG CTTATGATGA AATTCTTATT
GTGGCGCATT CGTTGGGGGC TGTTATTTCT CGACGAGCAT TATTAGATGC GCCCAAAAGG
GGATTTGATT GGGGTAATAA AACAAAACTT GTTTTATATG CTCCAGCACA TATGGGGGCA
AGGGTAGTAG CTTTAGCCAT TGAGACTTCA AGTGCAATTC CAATACTAAA GTACTTTTGT
TCATTGGTAC GTTTTTCATC CCCATTGGTA GAACAGCTTC AGCCTGGTTC TGCTGTGTTG
CAAGCTCTAA AGGCCGATAC ATTGTCTGCA ATTGTTAATA GTAAAAATAA ACATTTGGTG
GCAAAGAAAG TCATTATCGC CGAATACGAA AAGATTGTTA GCAATGATAC TTTTGCCGGT
GATCCTCCGC CTGTTGCAAT TCCTGGAGTG AATCATATTG GTGTATGCAA ACCTACAAAA
AGTTTTAACT CGCCACTGCT TCATCTGGAG GATTGTTTAT GA
 
Protein sequence
MQTHLLPKLL KGGISATGEA RVMFSMKPNR KAIVFIHGFN GNAIKTWADF HELLPNSPKS 
EGRDIYFYGY DGLRSELIAS AAIFGNFLNQ LFNNITPILK DNLSQPAQRS SSFAYDEILI
VAHSLGAVIS RRALLDAPKR GFDWGNKTKL VLYAPAHMGA RVVALAIETS SAIPILKYFC
SLVRFSSPLV EQLQPGSAVL QALKADTLSA IVNSKNKHLV AKKVIIAEYE KIVSNDTFAG
DPPPVAIPGV NHIGVCKPTK SFNSPLLHLE DCL