Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1499 |
Symbol | |
ID | 3965027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1932230 |
End bp | 1933051 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637920577 |
Product | hypothetical protein |
Protein accession | YP_526973 |
Protein GI | 90021146 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00687869 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGACTC ATTTGTTGCC TAAATTACTT AAGGGCGGCA TCTCTGCAAC TGGAGAGGCG CGGGTCATGT TCTCGATGAA GCCCAATCGA AAAGCTATTG TGTTTATCCA TGGATTTAAT GGGAATGCAA TTAAGACTTG GGCAGATTTT CATGAGCTCT TACCCAATTC GCCCAAAAGT GAAGGTCGTG ATATTTATTT TTATGGCTAC GATGGTTTAA GGTCAGAATT AATAGCTAGC GCGGCTATAT TTGGCAATTT TCTAAACCAA TTGTTTAATA ATATTACCCC AATACTAAAA GACAATTTAT CGCAACCTGC GCAACGCTCT TCAAGCTTTG CTTATGATGA AATTCTTATT GTGGCGCATT CGTTGGGGGC TGTTATTTCT CGACGAGCAT TATTAGATGC GCCCAAAAGG GGATTTGATT GGGGTAATAA AACAAAACTT GTTTTATATG CTCCAGCACA TATGGGGGCA AGGGTAGTAG CTTTAGCCAT TGAGACTTCA AGTGCAATTC CAATACTAAA GTACTTTTGT TCATTGGTAC GTTTTTCATC CCCATTGGTA GAACAGCTTC AGCCTGGTTC TGCTGTGTTG CAAGCTCTAA AGGCCGATAC ATTGTCTGCA ATTGTTAATA GTAAAAATAA ACATTTGGTG GCAAAGAAAG TCATTATCGC CGAATACGAA AAGATTGTTA GCAATGATAC TTTTGCCGGT GATCCTCCGC CTGTTGCAAT TCCTGGAGTG AATCATATTG GTGTATGCAA ACCTACAAAA AGTTTTAACT CGCCACTGCT TCATCTGGAG GATTGTTTAT GA
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Protein sequence | MQTHLLPKLL KGGISATGEA RVMFSMKPNR KAIVFIHGFN GNAIKTWADF HELLPNSPKS EGRDIYFYGY DGLRSELIAS AAIFGNFLNQ LFNNITPILK DNLSQPAQRS SSFAYDEILI VAHSLGAVIS RRALLDAPKR GFDWGNKTKL VLYAPAHMGA RVVALAIETS SAIPILKYFC SLVRFSSPLV EQLQPGSAVL QALKADTLSA IVNSKNKHLV AKKVIIAEYE KIVSNDTFAG DPPPVAIPGV NHIGVCKPTK SFNSPLLHLE DCL
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