9 homologs were found in PanDaTox collection
for query gene Avi_9822 on replicon NC_011986
Organism: Agrobacterium vitis S4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011986  Avi_9822  type IV secrection system pilin protein  100 
 
 		 116 aa  213  9.999999999999999e-55  Agrobacterium vitis S4  Bacteria  n/a    n/a   
 
 
-
 
NC_009622  Smed_6407  VIRB2 type IV secretion fmaily protein  76.79 
 
 		 112 aa  159  1e-38  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008242  Meso_4179  VIRB2 type IV secretion  70.37 
 
 		 111 aa  136  7e-32  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
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NC_009669  Oant_4564  VIRB2 type IV secretion fmaily protein  62.28 
 
 		 115 aa  131  3e-30  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.123188  n/a   
 
 
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NC_007960  Nham_4447  conjugal transfer protein, trbC  42.86 
 
 		 101 aa  63.5  0.0000000008  Nitrobacter hamburgensis X14  Bacteria  normal  0.633969  n/a   
 
 
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NC_009717  Xaut_5088  VIRB2 type IV secretion fmaily protein  41.38 
 
 		 100 aa  52.4  0.000002  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
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NC_009508  Swit_5009  VIRB2 type IV secretion fmaily protein  37.11 
 
 		 113 aa  48.1  0.00004  Sphingomonas wittichii RW1  Bacteria  normal  0.0925105  normal  0.161179 
 
 
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NC_009475  BBta_p0257  Type IV secretory pathway AvhB2 protein  36.17 
 
 		 98 aa  43.5  0.001  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  1 
 
 
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NC_012792  Vapar_5814  Conjugal transfer protein TrbC  55.81 
 
 		 110 aa  40.4  0.007  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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