11 homologs were found in PanDaTox collection
for query gene Amir_3956 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_3956  hypothetical protein  100 
 
 
272 aa  500  1e-141  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_28570  hypothetical protein  41.63 
 
 
395 aa  134  9.999999999999999e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.189802 
 
 
-
 
NC_013093  Amir_6106  hypothetical protein  40.99 
 
 
435 aa  133  3e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  0.391324  n/a   
 
 
-
 
NC_013159  Svir_31950  hypothetical protein  34.48 
 
 
304 aa  122  9e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0149885  normal  0.132693 
 
 
-
 
NC_013159  Svir_26990  hypothetical protein  39.02 
 
 
311 aa  88.6  1e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0992393  normal  0.928887 
 
 
-
 
NC_013441  Gbro_1948  hypothetical protein  35.02 
 
 
306 aa  75.1  0.000000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.503185  n/a   
 
 
-
 
NC_013757  Gobs_4115  hypothetical protein  34.89 
 
 
420 aa  72.4  0.000000000008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0889564  n/a   
 
 
-
 
NC_014158  Tpau_1263  myosin  29.64 
 
 
348 aa  70.5  0.00000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0914958  n/a   
 
 
-
 
NC_013235  Namu_3105  hypothetical protein  31.54 
 
 
510 aa  56.6  0.0000004  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00284275  hitchhiker  0.0000774683 
 
 
-
 
NC_013522  Taci_1264  DivIVA family protein  33.59 
 
 
209 aa  55.5  0.0000009  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.746002  n/a   
 
 
-
 
NC_009953  Sare_2763  hypothetical protein  37.65 
 
 
497 aa  45.4  0.0009  Salinispora arenicola CNS-205  Bacteria  normal  0.649804  hitchhiker  0.000815548 
 
 
-
 
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