| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6106 |
|---|
| Symbol | |
|---|
| ID | 8330316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 7164843 |
|---|
| End bp | 7166150 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644946539 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003103759 |
|---|
| Protein GI | 256380099 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.391324 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCTCG CCGACGACCG TGACCTCGTT CCCCTCGGCT CCGGCTTCGA CGTCGTCAAA
CGCGGGTACG ACCGCGGGCA GGTCGAGGAG CACCTGGAGC GCCTCGACTC CGACCTGCGC
CTGCTCGCCG CCGACCGCGA CGCGGCCATG TCGCAGACCA GCGACCTGGC CCGCCAGCTG
GAGGCCGCGC GCTCCGAGAT GGCGGACCTG CGCAACCAGA TCGACCGCCT GTCGATGCCC
CCCACCACGC TGGAGGGGCT GAGCGAGCGG TTGCAGCGGA TGCTGCGCCT GGCGCAGGAC
GAGGCCAACG AGATCAAGGC GCGCGCCGAG GCCGAGGGCG GGCACATCCG GGCCAAGGCC
GAGTCGGACG CGGGCGCGCT GCGCAGCAGG TACGACGCCC TGATCGGCGA GCTGGACCAG
CGCCGCGCCG ACATGGAGAA CGAGCACCGG GGCGTGCTGG AGGGCGCGCG CGCCGAGGCC
GAGAAGATCG TCGCGGACGC GCGCGAGCAG GCGGGCCGGA TCGACCAGGA GGCGCAGCAG
CGCCGCACCA CGGTCGAGGA GGACTTCGAG ATCGCGATGG CGGCCCGTCG CGTGGAGTCG
ATGAAGACGC TCGCCGAGCA GGAGGCGGGC AGCAAGAACG AGGCCGAGCG CAGGCTCCGC
GAGGCGACCG ACGAGGCGGC CCGGATCAGG GCGCAGGTCG CGCAGGAGCA GGCGGCGGCG
AACGCGGAGG CCCAGCGCCT GGTGCGCGAG GCCACCGAGG AGGCGAACCG CAGGCGGCAC
GACTCGCTGT CCGAGGCGAC CGCGCGCGTG CAGGAGGCCA CGGACGAGGC GAACCGCCGG
GTCCGGGAGG CCACCGAGGA GTCCAACCGC AGGGTGACGT CGGCGACGCA GAAGGTCGAG
GCGCTCAAGC AGCTGCGCAA CCGGCTGTCG CAGCAGCTGC ACTCGGTGCG CTCGGCCCTG
CTGGACGTGA CCCCGCTGCT GGACCCGCTG GACGACGAGC AGCAGGCCCG CGCCGCCGAG
GAGGCGGGCG CGTCCCCGCA GGTCGCGGCG ACGCAGGTGG CCGCCTCGAT CGCGACGTCC
CAGGTGACGG CCGGGTCGGC GCCGAAGCCC GCGGGCGCGG AGGCGACCCA GCTGATGGCG
CGCCCGAAGC CGGTGGACAA GAAGGCCGCC GAGGTCGACC CGGTGACCGT GCAGCTCGCG
GGCAAGCAGG GCGAGCAGCA GGAGAACAAG CCCCCGCAGG CCCCGGACGG CCCGACCCAG
AAGATGGTCC GCCCGATCCC GCCGAAGGCC CAGCCCGCCC AGCGCTGA
|
|---|
| Protein sequence | MGLADDRDLV PLGSGFDVVK RGYDRGQVEE HLERLDSDLR LLAADRDAAM SQTSDLARQL
EAARSEMADL RNQIDRLSMP PTTLEGLSER LQRMLRLAQD EANEIKARAE AEGGHIRAKA
ESDAGALRSR YDALIGELDQ RRADMENEHR GVLEGARAEA EKIVADAREQ AGRIDQEAQQ
RRTTVEEDFE IAMAARRVES MKTLAEQEAG SKNEAERRLR EATDEAARIR AQVAQEQAAA
NAEAQRLVRE ATEEANRRRH DSLSEATARV QEATDEANRR VREATEESNR RVTSATQKVE
ALKQLRNRLS QQLHSVRSAL LDVTPLLDPL DDEQQARAAE EAGASPQVAA TQVAASIATS
QVTAGSAPKP AGAEATQLMA RPKPVDKKAA EVDPVTVQLA GKQGEQQENK PPQAPDGPTQ
KMVRPIPPKA QPAQR
|
|---|
| |