10 homologs were found in PanDaTox collection
for query gene Amir_0161 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_0161  LPXTG-motif cell wall anchor domain protein  100 
 
 
416 aa  832    Actinosynnema mirum DSM 43827  Bacteria  normal  0.359865  n/a   
 
 
-
 
NC_013159  Svir_00450  hypothetical protein  37.85 
 
 
393 aa  226  4e-58  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.472915  normal  0.53291 
 
 
-
 
NC_014210  Ndas_0167  LPXTG-motif cell wall anchor domain protein  37.41 
 
 
408 aa  169  1e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.926777 
 
 
-
 
NC_014210  Ndas_0164  LPXTG-motif cell wall anchor domain protein  38.49 
 
 
412 aa  164  3e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0607  surface protein  36.33 
 
 
414 aa  158  2e-37  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1612  LPXTG-motif cell wall anchor domain protein  31.11 
 
 
723 aa  104  3e-21  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0608  surface protein  29.39 
 
 
388 aa  95.5  1e-18  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0168  LPXTG-motif cell wall anchor domain protein  27.53 
 
 
389 aa  81.6  0.00000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6086  LPXTG-motif cell wall anchor domain-containing protein  27.86 
 
 
360 aa  56.6  0.0000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.81295  normal  0.959126 
 
 
-
 
NC_013947  Snas_0267  LPXTG-motif cell wall anchor domain-containing protein  32.37 
 
 
357 aa  51.6  0.00003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
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