Gene Ndas_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_0168 
Symbol 
ID9243999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp210696 
End bp211865 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content73% 
IMG OID 
ProductLPXTG-motif cell wall anchor domain protein 
Protein accessionYP_003678124 
Protein GI297559150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCA TCCTGCGTCG GTACGCCGCG CTGCTTTCCA CCTCGGCCCT GATCGGCACC 
CTGCTGGGCG CCCCGGCGGC CAGCGCCGAC GACTTCTCAC GTGTGGACCG CGACCCCGTC
GAGGGCGCGC CGCTCGTGCT CGCCGACGGC CGGGAGGCCG ACACGGCGCT GTTCAGCCTG
CGCGTGGCCG AACACGCCTC GGTCCGGGCC TACACGGTGA CCGCGGACGA GGAGGTCCAC
CCGTACGCGG CCTACGTGGA GTCAGCGTGG TCGGACGTTC CGGAGTGGAC CGAAACCCCG
CAGGAAACGG ATCCCGCCGA CCGGGCGGAC TGGATCGTCT CCCATTCCTA TCCGACGGTC
GGTCTGGAGT CCCTGCTGGA GGGGAGCGAC CTGCCCCGGT TGGACGAGGC ACGGGCGATC
GCGGGCACCC AGGCCGCCCT GTGGCACGTG CTGGAGGGGG TGCGGCCGGA CCCCGGCGCC
AACGACCCGG GCGTCATGGC GCTGTACGAC CACCTGGTGG AGGGCAGCGC GTCCGCGCCG
GACAACACCG TCTCCCGGTC CCTGGCGGTG TCGCCGTCCC ACGTGGAGGC GGTCGCCCCC
GAGGAGCCGC TGGGGCCGTT GACCGTGCAC AGCTCCGGAG CGGAGCCGGT GTCGGTGTCG
GTGCGCGGCG CCCCGGCGTC GTGGCTGGTC GACGCGGACG GGGAGCAGGT CACGCAGCTG
GGCGACGGCG AGCGGGTCTT CCTGGACGTG GACCCGTCGG TCCCGGCGGG CGTGGCGACC
CTGCACCTGC ACGGCCGGGA CTTCCCGCTG CCGCAGGGGC GCCTGTTCAC CGGCAGGGAC
GGCGTGCGCA CCCGGTCCCT GGTGACCGCG GAGGCGGGTT CGGCGACGAG TTCGGCCACC
GCGACGTTCA CGTGGCACCC GGAGCAGACC GAGGAGCCGG TGGCCGCGGC GAGCCCGGAG
CCCGTGCCGG AGGAGGAACC CCCCGCCACC GAGGAGGCCG TCGAGGAGGA GGTTCCCGCC
GAGGAGGTAT CTCCCACAGC GGAGGACCGA ATCCCCGAGG ACGATCTGGC CCTCACCGGA
ACCTGGCTGT CCGGGCTGCT GGTGATCGCG GGGGCCCTGG TGGTATCCGG CCTGATCATC
CTGGTTGTGG GACGTAAACG ACGCGACTGA
 
Protein sequence
MSGILRRYAA LLSTSALIGT LLGAPAASAD DFSRVDRDPV EGAPLVLADG READTALFSL 
RVAEHASVRA YTVTADEEVH PYAAYVESAW SDVPEWTETP QETDPADRAD WIVSHSYPTV
GLESLLEGSD LPRLDEARAI AGTQAALWHV LEGVRPDPGA NDPGVMALYD HLVEGSASAP
DNTVSRSLAV SPSHVEAVAP EEPLGPLTVH SSGAEPVSVS VRGAPASWLV DADGEQVTQL
GDGERVFLDV DPSVPAGVAT LHLHGRDFPL PQGRLFTGRD GVRTRSLVTA EAGSATSSAT
ATFTWHPEQT EEPVAAASPE PVPEEEPPAT EEAVEEEVPA EEVSPTAEDR IPEDDLALTG
TWLSGLLVIA GALVVSGLII LVVGRKRRD