| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_0267 |
|---|
| Symbol | |
|---|
| ID | 8881446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 282397 |
|---|
| End bp | 283470 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | LPXTG-motif cell wall anchor domain-containing protein |
|---|
| Protein accession | YP_003509078 |
|---|
| Protein GI | 291297800 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGT CCTGGATCCG CGCGGGTGTG GCGACCGCGG CCGTCGGCAC ACTCGGCATC
GCCACCGCGG GCCCCGCGAT GGCCGAAGAC AGCGAGAAGT ACAACTACGC CGGCCTGTTC
GGCGCCGGAG ACGGCTACAC CCTCAACACC CCCGACGGCA GCAAGCTCGT CGCCAACACC
ACCGGCATCT ACCCCGAAGA GGACGAGGCG GGCGAGGCCC GTACCTATCG CCTGGACACC
ACGCCGGTGT CGGAGGACCC GGAGATCGTC TACGACAAGC ACCCGTGGGC CGACACCTCG
ATCGGCAACC TCGGGCGGGT GAAGTGGATC GTCGACAACA GTTTCCCGAC GATCGACGCG
GCCACCGTCG CCGACAAGGC CGGAGCCGAC CTGACCGGCG TCGCCGACCC CGACAAGGCC
GCCTACACCG CCACCCAGGC CGCGATCTGG GTGCTGACCT CGGATCTGAA GCTCAACCCG
GACGACCCGA CCGGCGAGAA CGACGCCGTC GACGCCGCCG TCCTCGACAT CACCCACTAC
CTCATCAACG AGAACGAGCG CATCGCCGAA CCCAGTGACG CGTTCACCGT CGAGGGGAAG
GCGAAATGGG ACGGCAAGCG CCTGGGCCCG TTCCACTTCG ACGGCGTCGA CGACGAGGGC
TGGGTCATGG CCCATAAGGT GGACAGCGGC CACGAGGCGG GCAAGGTCGT CGACGAGGAC
GGCAAGAAAC TGACCCACCT CGAACCGGGC CAGAAGTTCT ACGTCGATCC CAACAAGGGC
ATCAAGAAGC TGGTCATCGG CGGTATCGCC ACCGACTCCC CGAAGGCCGG AACCCTGATG
CTGCCCCGGT ACGACAAGAG CCAGCCCACC CTGATCCTGG CCGAGGACGC CGGTTACGGC
GTCACCACCA GCCGCACCGT CACGGTCGGC GGTGGCAGTG GCAGCGGTGG CGATGACATC
CTCCCGGTCA CCGGCATGAG CCTGACCGGC GTGATGGGCA TCGGCGCCGC CCTGCTGGTC
GGCGGAGCCC TGACCCTGGT CCTGCTGCGC CGCCGCGCGA CCGCCGAGGT CTGA
|
|---|
| Protein sequence | MKKSWIRAGV ATAAVGTLGI ATAGPAMAED SEKYNYAGLF GAGDGYTLNT PDGSKLVANT
TGIYPEEDEA GEARTYRLDT TPVSEDPEIV YDKHPWADTS IGNLGRVKWI VDNSFPTIDA
ATVADKAGAD LTGVADPDKA AYTATQAAIW VLTSDLKLNP DDPTGENDAV DAAVLDITHY
LINENERIAE PSDAFTVEGK AKWDGKRLGP FHFDGVDDEG WVMAHKVDSG HEAGKVVDED
GKKLTHLEPG QKFYVDPNKG IKKLVIGGIA TDSPKAGTLM LPRYDKSQPT LILAEDAGYG
VTTSRTVTVG GGSGSGGDDI LPVTGMSLTG VMGIGAALLV GGALTLVLLR RRATAEV
|
|---|
| |