13 homologs were found in PanDaTox collection
for query gene YPK_0997 on replicon NC_010465
Organism: Yersinia pseudotuberculosis YPIII



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009708  YpsIP31758_0946  polysaccharide lyase family protein 8  99.71 
 
 		 1024 aa  2115    Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
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NC_010159  YpAngola_A3277  polysaccharide lyase family protein 8  99.61 
 
 		 1024 aa  2114    Yersinia pestis Angola  Bacteria  normal  1  hitchhiker  0.00028263 
 
 
-
 
NC_010465  YPK_0997  lyase catalytic  100 
 
 		 1024 aa  2123    Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_2256  chondroitinase  31.47 
 
 		 1043 aa  449  1.0000000000000001e-124  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0824242 
 
 
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NC_013061  Phep_0784  Lyase catalytic  28.08 
 
 		 1030 aa  358  1.9999999999999998e-97  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_2838  Lyase catalytic  24.95 
 
 		 1077 aa  211  8e-53  Pedobacter heparinus DSM 2366  Bacteria  normal  1  decreased coverage  0.00102032 
 
 
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NC_013061  Phep_0786  polysaccharide lyase family 8  27.85 
 
 		 700 aa  65.5  0.000000004  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013201  Hmuk_3227  Hyaluronate lyase  24.36 
 
 		 1131 aa  59.7  0.0000003  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_008262  CPR_0390  polysaccharide lyase family protein 8  25.84 
 
 		 985 aa  55.1  0.000007  Clostridium perfringens SM101  Bacteria  normal  0.918566  n/a   
 
 
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NC_008261  CPF_0394  polysaccharide lyase family protein 8  25.84 
 
 		 1003 aa  54.3  0.00001  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_4325  chondroitin AC lyase  24.38 
 
 		 693 aa  53.5  0.00002  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
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NC_013947  Snas_0850  Hyaluronate lyase  28.48 
 
 		 792 aa  51.2  0.00009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_0500  polysaccharide lyase family 8  23.05 
 
 		 533 aa  45.4  0.005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.346359  n/a   
 
 
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