14 homologs were found in PanDaTox collection
for query gene Mext_1160 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010172  Mext_1160  helix-turn-helix domain-containing protein  100 
 
 		 98 aa  198  1.9999999999999998e-50  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.476577 
 
 
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NC_011757  Mchl_1320  transcriptional regulator, XRE family  100 
 
 		 98 aa  198  1.9999999999999998e-50  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
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NC_010725  Mpop_0269  transcriptional regulator, XRE family  94.9 
 
 		 98 aa  190  6e-48  Methylobacterium populi BJ001  Bacteria  normal  0.75294  normal  1 
 
 
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NC_011887  Mnod_8001  transcriptional regulator, XRE family  81.44 
 
 		 118 aa  167  4e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
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NC_010511  M446_1273  XRE family transcriptional regulator  81.44 
 
 		 103 aa  166  7e-41  Methylobacterium sp. 4-46  Bacteria  normal  0.31863  normal  0.4589 
 
 
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NC_010510  Mrad2831_5908  XRE family transcriptional regulator  78.57 
 
 		 108 aa  164  4e-40  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.209414  hitchhiker  0.00928486 
 
 
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NC_007641  Rru_B0041  XRE family transcriptional regulator  58.76 
 
 		 103 aa  125  2.0000000000000002e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0601255  n/a   
 
 
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NC_008042  TM1040_3842  XRE family transcriptional regulator  55.1 
 
 		 100 aa  110  4.0000000000000004e-24  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.039108 
 
 
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NC_012791  Vapar_2697  transcriptional regulator, XRE family  31.82 
 
 		 126 aa  61.6  0.000000003  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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NC_013165  Shel_06770  predicted transcriptional regulator  37.14 
 
 		 106 aa  45.4  0.0002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
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NC_011830  Dhaf_0650  transcriptional regulator, XRE family  37.1 
 
 		 110 aa  42.7  0.001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
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NC_009253  Dred_0875  XRE family transcriptional regulator  38.98 
 
 		 77 aa  42.4  0.002  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000023095  n/a   
 
 
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NC_013204  Elen_1374  transcriptional regulator, XRE family  40 
 
 		 71 aa  40.8  0.006  Eggerthella lenta DSM 2243  Bacteria  normal  0.111041  normal  0.717323 
 
 
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NC_013730  Slin_3290  transcriptional regulator, XRE family  30.3 
 
 		 67 aa  40.4  0.008  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.605967 
 
 
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