15 homologs were found in PanDaTox collection
for query gene Maeo_1079 on replicon NC_009635
Organism: Methanococcus aeolicus Nankai-3



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009635  Maeo_1079  CRISPR-associated RAMP Csm5 family protein  100 
 
 
385 aa  760    Methanococcus aeolicus Nankai-3  Archaea  normal  0.485474  n/a   
 
 
-
 
NC_009972  Haur_2479  CRISPR-associated RAMP Csm5 family protein  22.82 
 
 
362 aa  80.5  0.00000000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_1256  CRISPR-associated RAMP protein, Csm5 family  25.45 
 
 
380 aa  63.5  0.000000005  Chlorobium phaeobacteroides BS1  Bacteria  normal  hitchhiker  0.00374145 
 
 
-
 
NC_014212  Mesil_0703  CRISPR-associated RAMP protein, Csm5 family  18.5 
 
 
376 aa  61.2  0.00000003  Meiothermus silvanus DSM 9946  Bacteria  normal  0.932167  hitchhiker  0.00582507 
 
 
-
 
NC_012034  Athe_2700  CRISPR-associated RAMP protein, Csm5 family  24.01 
 
 
390 aa  58.2  0.0000003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1633  CRISPR-associated RAMP protein, Csm5 family  25.33 
 
 
485 aa  53.5  0.000005  Rhodothermus marinus DSM 4252  Bacteria  decreased coverage  0.0000163126  n/a   
 
 
-
 
NC_008532  STER_0977  hypothetical protein  25.87 
 
 
357 aa  53.1  0.000008  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0608  CRISPR-associated RAMP protein, Csm5 family  27.3 
 
 
381 aa  53.1  0.000008  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1674  CRISPR-associated RAMP Csm5 family protein  24.29 
 
 
353 aa  52.4  0.00001  Thermosipho melanesiensis BI429  Bacteria  normal  0.901558  n/a   
 
 
-
 
NC_009486  Tpet_1093  CRISPR-associated RAMP Csm5 family protein  23.1 
 
 
379 aa  51.6  0.00002  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1013  CRISPR-associated RAMP Csm5 family protein  22.55 
 
 
379 aa  51.2  0.00003  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_1392  CRISPR-associated RAMP Csm5 family protein  21.35 
 
 
381 aa  49.3  0.0001  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP2457  CRISPR-associated Csm5 family protein  24.62 
 
 
340 aa  48.1  0.0003  Staphylococcus epidermidis RP62A  Bacteria  normal  0.0486574  n/a   
 
 
-
 
NC_013502  Rmar_2822  CRISPR-associated RAMP protein, Csm5 family  18.34 
 
 
550 aa  48.1  0.0003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.0845679  n/a   
 
 
-
 
NC_013926  Aboo_1024  CRISPR-associated RAMP protein, Csm5 family  26.57 
 
 
380 aa  44.3  0.003  Aciduliprofundum boonei T469  Archaea  decreased coverage  0.00000034991  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>