100 decreased-coverage genes were found for selected organism/s



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Locus tag

Gene type

Replicon accession

From

To

Strand

Gene Length

Product

Protein accession

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Organism name

Kingdom

Coverage Plot

PanDaTox homologs

Experimental validation
Teth514_0009  CDS  NC_010320  9195  11096  1902  DNA gyrase subunit B  YP_001661669  decreased coverage  6.95632e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0028  CDS  NC_010320  31701  32972  1272  seryl-tRNA synthetase  YP_001661688  decreased coverage  3.46844e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0029  CDS  NC_010320  33814  34539  726  GDSL family lipase  YP_001661689  decreased coverage  8.04758e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0049  CDS  NC_010320  53601  54548  948  ROK family glucokinase  YP_001661708  decreased coverage  0.00642511  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0078  CDS  NC_010320  78756  80228  1473  microtubule-severing ATPase  YP_001661736  decreased coverage  3.78681e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0089  CDS  NC_010320  88046  89572  1527  transcription termination factor Rho  YP_001661747  decreased coverage  3.46786e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0122  CDS  NC_010320  118767  119093  327  response regulator receiver protein  YP_001661780  decreased coverage  0.000835049  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0140  CDS  NC_010320  137878  139221  1344  TrkH family potassium uptake protein  YP_001661798  decreased coverage  1.06231e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0170  CDS  NC_010320  171527  172957  1431  phosphotransferase system, EIIC  YP_001661825  decreased coverage  0.00257735  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0253  CDS  NC_010320  267461  268183  723  phosphate ABC transporter ATP-binding protein  YP_001661906  decreased coverage  7.10517e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0255  CDS  NC_010320  269275  271725  2451  leucyl-tRNA synthetase  YP_001661908  decreased coverage  0.00083346  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0321  CDS  NC_010320  336680  338560  1881  glutamate-1-semialdehyde-2,1-aminomutase  YP_001661973  decreased coverage  0.00115564  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0322  CDS  NC_010320  338666  338920  255  hypothetical protein  YP_001661974  decreased coverage  1.1457e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0323  CDS  NC_010320  339027  339776  750  cobalt transport protein CbiM  YP_001661975  decreased coverage  0.00019504  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0403  CDS  NC_010320  414326  415384  1059  inner-membrane translocator  YP_001662051  decreased coverage  0.00495406  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0515  CDS  NC_010320  530006  531544  1539  GMP synthase  YP_001662159  decreased coverage  6.05671e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0516  CDS  NC_010320  531918  533300  1383  xanthine/uracil/vitamin C permease  YP_001662160  decreased coverage  2.74491e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0543  CDS  NC_010320  562700  563281  582  hypothetical protein  YP_001662187  decreased coverage  0.00906891  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0582  CDS  NC_010320  603858  604871  1014  alanine racemase  YP_001662226  decreased coverage  5.48778e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0623  CDS  NC_010320  646370  648028  1659  4-phytase  YP_001662267  decreased coverage  0.000146122  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0624  CDS  NC_010320  648886  649560  675  hypothetical protein  YP_001662268  decreased coverage  0.000212661  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0632  CDS  NC_010320  658840  660723  1884  ABC transporter related  YP_001662276  decreased coverage  1.38472e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0667  CDS  NC_010320  701208  701963  756  phosphoglyceromutase  YP_001662311  decreased coverage  9.97316e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0668  CDS  NC_010320  702055  702576  522  Ferritin, Dps family protein  YP_001662312  decreased coverage  2.53889e-06  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0679  CDS  NC_010320  712938  714257  1320  major facilitator transporter  YP_001662322  decreased coverage  8.76885e-06  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0680  CDS  NC_010320  714277  714654  378  desulfoferrodoxin  YP_001662323  decreased coverage  3.46989e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0682  CDS  NC_010320  715139  716557  1419  aspartate ammonia-lyase  YP_001662325  decreased coverage  3.28745e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0697  CDS  NC_010320  728634  729539  906  Ppx/GppA phosphatase  YP_001662340  decreased coverage  1.53349e-08  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0754  CDS  NC_010320  782410  783384  975  binding-protein-dependent transport systems inner membrane component  YP_001662394  decreased coverage  2.04062e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0791  CDS  NC_010320  823582  824958  1377  tRNA(Ile)-lysidine synthetase  YP_001662430  decreased coverage  3.25177e-06  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0792  CDS  NC_010320  824984  825529  546  hypoxanthine phosphoribosyltransferase  YP_001662431  decreased coverage  7.42772e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0793  CDS  NC_010320  825601  827436  1836  ATP-dependent metalloprotease FtsH  YP_001662432  decreased coverage  1.70708e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0797  CDS  NC_010320  831349  832899  1551  carboxyl transferase  YP_001662436  decreased coverage  5.27493e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0834  CDS  NC_010320  869627  870646  1020  ATP:guanido phosphotransferase  YP_001662473  decreased coverage  5.29027e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0891  CDS  NC_010320  916919  917059  141  50S ribosomal protein L36  YP_001662529  decreased coverage  1.31668e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0892  CDS  NC_010320  917071  917439  369  30S ribosomal protein S13  YP_001662530  decreased coverage  3.37976e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0973  CDS  NC_010320  993649  993807  159  rubredoxin-type Fe(Cys)4 protein  YP_001662610  decreased coverage  4.69593e-10  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_0974  CDS  NC_010320  993893  995191  1299  thiamine biosynthesis protein ThiC  YP_001662611  decreased coverage  8.93445e-08  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1024  CDS  NC_010320  1054598  1056232  1635  sigma-54 dependent trancsriptional regulator  YP_001662659  decreased coverage  7.01357e-06  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1049  CDS  NC_010320  1082556  1083752  1197  carboxyl-terminal protease  YP_001662684  decreased coverage  9.50158e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1050  CDS  NC_010320  1083762  1085006  1245  PDZ/DHR/GLGF domain-containing protein  YP_001662685  decreased coverage  2.25912e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1053  CDS  NC_010320  1087901  1090684  2784  excinuclease ABC, A subunit  YP_001662688  decreased coverage  0.00826345  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1054  CDS  NC_010320  1090694  1091098  405  FHA domain-containing protein  YP_001662689  decreased coverage  3.40466e-06  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1115  CDS  NC_010320  1157978  1159297  1320  extracellular solute-binding protein  YP_001662749  decreased coverage  3.27347e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1125  CDS  NC_010320  1167573  1167932  360  hypothetical protein  YP_001662759  decreased coverage  2.29071e-08  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1155  CDS  NC_010320  1193764  1194459  696  two component transcriptional regulator  YP_001662787  decreased coverage  4.30064e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1195  CDS  NC_010320  1232950  1234701  1752  pyruvate kinase., pyruvate, water dikinase  YP_001662825  decreased coverage  6.47409e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1196  CDS  NC_010320  1234753  1235169  417  thioesterase superfamily protein  YP_001662826  decreased coverage  2.35881e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1233  CDS  NC_010320  1274516  1275076  561  hypothetical protein  YP_001662863  decreased coverage  2.72813e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1234  CDS  NC_010320  1275073  1277007  1935  DNA-directed DNA polymerase  YP_001662864  decreased coverage  1.17572e-06  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1263  CDS  NC_010320  1298910  1301468  2559  phage tape measure protein  YP_001662892  decreased coverage  0.00378287  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1282  CDS  NC_010320  1320782  1320949  168  hypothetical protein  YP_001662911  decreased coverage  1.54652e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1283  CDS  NC_010320  1321106  1321471  366  hypothetical protein  YP_001662912  decreased coverage  3.50196e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1284  CDS  NC_010320  1321485  1322816  1332  recombination factor protein RarA  YP_001662913  decreased coverage  2.41266e-06  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1295  CDS  NC_010320  1331772  1331960  189  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  YP_001662924  decreased coverage  4.05521e-10  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1314  CDS  NC_010320  1352111  1353184  1074  RNA polymerase sigma factor RpoD  YP_001662942  decreased coverage  1.45678e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1354  CDS  NC_010320  1392216  1392686  471  SsrA-binding protein  YP_001662980  decreased coverage  0.000258997  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1401  CDS  NC_010320  1438593  1439183  591  alpha/beta fold family hydrolase/acetyltransferase-like protein  YP_001663026  decreased coverage  2.59828e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1402  CDS  NC_010320  1439302  1439517  216  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  YP_001663027  decreased coverage  4.74326e-10  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1406  CDS  NC_010320  1443694  1444899  1206  major facilitator transporter  YP_001663031  decreased coverage  7.73977e-08  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1469  CDS  NC_010320  1503271  1503720  450  D-tyrosyl-tRNA(Tyr) deacylase  YP_001663092  decreased coverage  4.73348e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1470  CDS  NC_010320  1503731  1504363  633  beta-lactamase domain-containing protein  YP_001663093  decreased coverage  1.22516e-08  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1471  CDS  NC_010320  1504386  1504637  252  MarR family transcriptional regulator  YP_001663094  decreased coverage  2.03767e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1571  CDS  NC_010320  1589948  1591156  1209  sodium:dicarboxylate symporter  YP_001663194  decreased coverage  2.75384e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1624  CDS  NC_010320  1641232  1642014  783  metallophosphoesterase  YP_001663246  decreased coverage  1.70043e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1631  CDS  NC_010320  1648597  1650723  2127  cell divisionFtsK/SpoIIIE  YP_001663253  decreased coverage  0.000209197  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1650  CDS  NC_010320  1665897  1670120  4224  DNA polymerase III PolC  YP_001663272  decreased coverage  0.00795258  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1662  CDS  NC_010320  1678714  1678998  285  hypothetical protein  YP_001663284  decreased coverage  1.96017e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1699  CDS  NC_010320  1708978  1709508  531  ATP-dependent protease peptidase subunit  YP_001663321  decreased coverage  4.08331e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1712  CDS  NC_010320  1720271  1720531  261  30S ribosomal protein S16  YP_001663334  decreased coverage  1.616e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1769  CDS  NC_010320  1772942  1773976  1035  ABC transporter related  YP_001663391  decreased coverage  3.33241e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1770  CDS  NC_010320  1773969  1774622  654  binding-protein-dependent transport systems inner membrane component  YP_001663392  decreased coverage  1.22974e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1783  CDS  NC_010320  1792496  1793263  768  3-ketoacyl-(acyl-carrier-protein) reductase  YP_001663404  decreased coverage  0.000332127  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1796  CDS  NC_010320  1805818  1807668  1851  extracellular solute-binding protein  YP_001663417  decreased coverage  8.01458e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1890  CDS  NC_010320  1905309  1905611  303  protein of unknown function YGGT  YP_001663506  decreased coverage  1.26042e-08  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_1891  CDS  NC_010320  1905628  1906041  414  hypothetical protein  YP_001663507  decreased coverage  1.4941e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2116  CDS  NC_010320  2123660  2123998  339  hypothetical protein  YP_001663724  decreased coverage  1.35569e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2117  CDS  NC_010320  2124002  2124316  315  50S ribosomal protein L21  YP_001663725  decreased coverage  1.35569e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2119  CDS  NC_010320  2125392  2125874  483  hypothetical protein  YP_001663727  decreased coverage  3.28262e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2138  CDS  NC_010320  2141808  2143553  1746  hydrogenase, Fe-only  YP_001663746  decreased coverage  8.65974e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2195  CDS  NC_010320  2196508  2197338  831  binding-protein-dependent transport systems inner membrane component  YP_001663803  decreased coverage  0.000532523  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2203  CDS  NC_010320  2205689  2206699  1011  periplasmic binding protein/LacI transcriptional regulator  YP_001663811  decreased coverage  3.48221e-08  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2204  CDS  NC_010320  2206748  2207449  702  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  YP_001663812  decreased coverage  6.14225e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2212  CDS  NC_010320  2215582  2216004  423  hypothetical protein  YP_001663820  decreased coverage  9.65632e-10  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2226    NC_010320  2228126  2228943  818      decreased coverage  2.24588e-05  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2239  CDS  NC_010320  2241650  2242189  540  NusG antitermination factor  YP_001663844  decreased coverage  0.000688878  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2312  CDS  NC_010320  2332527  2332967  441  hypothetical protein  YP_001663911  decreased coverage  0.000161835  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2334  CDS  NC_010320  2375617  2376201  585  YruB family glutaredoxin-like protein  YP_001663930  decreased coverage  5.73032e-08  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2335  CDS  NC_010320  2376434  2376694  261  hypothetical protein  YP_001663931  decreased coverage  1.30397e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2336  CDS  NC_010320  2376788  2377786  999  DNA repair photolyase-like protein  YP_001663932  decreased coverage  2.45241e-06  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2344  CDS  NC_010320  2383623  2384429  807  hypothetical protein  YP_001663940  decreased coverage  2.7404e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2371  CDS  NC_010320  2414329  2415558  1230  uracil-xanthine permease  YP_001663967  decreased coverage  1.54937e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2411  CDS  NC_010320  2455578  2456198  621  60 kDa inner membrane insertion protein  YP_001664006  decreased coverage  7.68674e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2412  CDS  NC_010320  2456217  2456426  210  hypothetical protein  YP_001664007  decreased coverage  1.17197e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_2413  CDS  NC_010320  2456423  2456773  351  ribonuclease P  YP_001664008  decreased coverage  2.05817e-09  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_R0001  tRNA  NC_010320  33055  33144  90  tRNA-Ser    decreased coverage  9.71993e-06  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_R0002  tRNA  NC_010320  33178  33271  94  tRNA-Ser    decreased coverage  9.20223e-06  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_R0022  tRNA  NC_010320  575271  575346  76  tRNA-Lys    decreased coverage  0.00514969  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_R0041  tRNA  NC_010320  1353233  1353307  75  tRNA-Asn    decreased coverage  4.01156e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
Teth514_R0069  tRNA  NC_010320  2394042  2394117  76  tRNA-Thr    decreased coverage  1.81822e-07  n/a    Thermoanaerobacter sp. X514  Bacteria 
 
 
-
 
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