| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1024 |
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| Symbol | |
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| ID | 5877532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | + |
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| Start bp | 1054598 |
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| End bp | 1056232 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641541378 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001662659 |
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| Protein GI | 167039674 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000701357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGGAA GAAGGGAAAT ATTAAGAACT CCTGTGAGTA TCCATTCTCA GATTGCTGCC
CATATTGTTC AAAAGGTTAG TCACATAAGC AGACAAAACA ATGTAAGCAT ATTTTTAAGG
AAGATAAATG ACAATAGGTT GATTCCTGCA AATAGTATGT TATCAATGGT GACTTTTTTT
GCTTCTCGGG GAGAAGAAAT AGAAGTAGTG GTAGAAGGAG CAAATGTGGA CAATGCTATA
AAAGAGTTTA AAGGCTTTTT TTACAACGAG TTAGGGAAAG AAAAGGAAGA AAAAACTACT
TATGAACTTT TAAAAAATAC CTCAATAGCC TATGAGAAAA TATTTAATTC TATTGGCTCA
GGACTTATAG TTACTGATGA AAATGGGGCA ATAATGATTT TTAACAAAGC AGCTGAAAGT
ATTACAGGGA TTAATATGGA CCAGGCTATA GGGAAAAAAA TACAAGAAGT GATGTCGGAT
ATAAAAATTG CTGATGTGTT AAAAACTGGC AAAGAAGAGA TGAATAAAAA ACTAAAAATA
GGCACAAATG TGGTGTTAAC AAATATAACA CCTATTTATA CAGGTACAAA AATAGAAGGG
GCGGTTATAG TATTTTATGA CTTCCCTCAA ATAGAATATT TGGAAAATGA GCTAAAAAGA
GATAGAAAAC TTGACAAAGC TTTTGACATA ATAATAGGCA ATAGCGGAAA ATTAAAAGAC
GCTCTTACTA TTGCTTCTAA AGCTGCAGAA ACTGATTCAA CAGTCCTCAT AAGAGGGGAA
AGCGGAACGG GGAAAGAGCT GGTGGCTAAT GCGATACATT ACGCCAGTAA GAGAAAGGAT
AAACCATTTA TAAGGGTAAA TTGTGCGGCT ATTCCTGTGA CTCTATTGGA GAGTGAACTT
TTTGGGCATG AAAGAGGAGC TTTTACTGGA GCTGTAACTC AAAAGATAGG AAAATTCGAA
TTAGCAGATG GAGGAACGAT ATTTCTTGAT GAAATAGGAG ATATTCCACC TGAGATTCAG
GTAAAGCTTT TGAGAGTGAT TCAAGAAAAG GAATTTGAAA GAGTAGGGGG AATAAAAACT
ATAAAAGTAG ATGTGAGGAT AATCGCTGCG ACAAATAAAG ATTTAGAAAA AGCAATAAAA
GAGGGGACTT TTAGAGAAGA TTTATACTAT AGATTAAACG TTATACCTGT GATTTTGCCT
CCATTAAGGG AAAGAAGAGG AGATATTCCT CTACTTGTCG AACATTTTAT AGAAAAGCTG
AACAAAAAAC TAAACAAAAA TGTAAAAAAG GTTACGAAAA AAGCTATGCA AGCATTGATA
TATTATGATT GGCCTGGGAA TATACGAGAA TTAGAAAATA TAATTGAAAG GTGTATAACA
TTAAGTGATA CTGATTACAT CGATTATGAA GATTTGCCCC AATATATTCG AAATGAAACT
ACTACTGTAT CAGATGATGA TATTATTTAT CTTGGAGAAA ATAGTGAGCT ACTTACAATG
GAGGAATATG AGTATAAAAT AATAAAGGCT GCGATACAAA GATATAAAAG CTTTAATAAA
GCAGGAAAAG TTTTAGGACT TACCCATAAA ACTATTGCTG CAAAAGCAAG GAAATTTGGA
CTTGTTGATA GATAA
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| Protein sequence | MEGRREILRT PVSIHSQIAA HIVQKVSHIS RQNNVSIFLR KINDNRLIPA NSMLSMVTFF
ASRGEEIEVV VEGANVDNAI KEFKGFFYNE LGKEKEEKTT YELLKNTSIA YEKIFNSIGS
GLIVTDENGA IMIFNKAAES ITGINMDQAI GKKIQEVMSD IKIADVLKTG KEEMNKKLKI
GTNVVLTNIT PIYTGTKIEG AVIVFYDFPQ IEYLENELKR DRKLDKAFDI IIGNSGKLKD
ALTIASKAAE TDSTVLIRGE SGTGKELVAN AIHYASKRKD KPFIRVNCAA IPVTLLESEL
FGHERGAFTG AVTQKIGKFE LADGGTIFLD EIGDIPPEIQ VKLLRVIQEK EFERVGGIKT
IKVDVRIIAA TNKDLEKAIK EGTFREDLYY RLNVIPVILP PLRERRGDIP LLVEHFIEKL
NKKLNKNVKK VTKKAMQALI YYDWPGNIRE LENIIERCIT LSDTDYIDYE DLPQYIRNET
TTVSDDDIIY LGENSELLTM EEYEYKIIKA AIQRYKSFNK AGKVLGLTHK TIAAKARKFG
LVDR
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