10 homologs were found in PanDaTox collection
for query gene Vapar_5664 on replicon NC_012792
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012792  Vapar_5664  protein of unknown function DUF1486  100 
 
 
257 aa  528  1e-149  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4443  hypothetical protein  52.21 
 
 
132 aa  137  1e-31  Sinorhizobium medicae WSM419  Bacteria  normal  0.253642  normal 
 
 
-
 
NC_013739  Cwoe_5586  protein of unknown function DUF1486  53.45 
 
 
118 aa  136  4e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1992  hypothetical protein  31.03 
 
 
132 aa  49.7  0.00005  Burkholderia sp. 383  Bacteria  normal  0.209953  normal  0.907507 
 
 
-
 
NC_010676  Bphyt_4362  protein of unknown function DUF1486  30.25 
 
 
136 aa  48.9  0.00007  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.364126 
 
 
-
 
NC_007952  Bxe_B0684  putative taurine dehydrogenase, small subunit  29.41 
 
 
136 aa  47.4  0.0002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4862  hypothetical protein  28.45 
 
 
128 aa  47  0.0003  Sinorhizobium medicae WSM419  Bacteria  normal  0.711922  normal  0.253154 
 
 
-
 
NC_010086  Bmul_4515  hypothetical protein  30.28 
 
 
134 aa  43.9  0.003  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.275606 
 
 
-
 
NC_009668  Oant_3504  hypothetical protein  29.84 
 
 
129 aa  43.1  0.004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.501161  n/a   
 
 
-
 
NC_010625  Bphy_6225  hypothetical protein  28.45 
 
 
133 aa  43.1  0.004  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
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