Gene Vapar_5664 details

Gene Information

• Locus tag: Vapar_5664
• ID: 7975717
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 371302
• End bp: 372075
• Gene Length: 774 bp
• Protein Length: 257 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644796247
• Product: protein of unknown function DUF1486
• Protein accession: YP_002947521
• Protein GI: 239820336

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGACG CAAGCAGTTT CATATTTTCC GATTCCGCAT CGGCCGGGGA GACGGCCGAT 
GCCGTGCGGC GCTTCATGGC CGCATTCCGG CACAAGGACG CCGCCGCCAT ACGGGAGCTC 
GTCGCTCCGG ATTGCATCAT GGAAGCGATG CAGCCGGCGC CCGACGGGCT GCGGGTGGAG 
GGCCAGGAGC CCAATGTCGC CTTCTGGCAG GCCATGATCG CGGATCCGAA CGGCGCCTTC 
GAGACCGAGG AAGTGGTCAT CTGCGGCGAC CGGGCGATCA ACCGCTGGCG CTACCGCTTC 
GGCGAGGGCC AGGAGAACTC GGTCCGGGGC GTCACGCTGA TCAAGGTGCG CCACGGCCGG 
ATCGCGGAGG CCCTGGGCTA CGCCAAGACA CCGGCGGTGT CGAACCTCGG CCAGGCCGGG 
CAGCAGAGCA CCTCCGAGGT CATCCGGCGG TTCAACGAGG TCTTCCAGCG GCATGATCCG 
ACGGCCCTCC CCGAACTGAT CGCCGCGGAC TGCGTCATCG AGAACACCAC GCCGGCGCCG 
AATGGCTCGC GCCATGTCGG CCACGACGCC TGCCTGGCGT TGTGGCGGGG AATCGCGACC 
CGTCCGGATA CCTGGTTCGA CATCGAGGAC GTGACGGTCG CCGGAGAGCG GGCGACGATC 
CGCTGGCGGC TGCACTGGGG CGAGGACGAG AGCCAGTCGG TGCGCGGCGT GAACCTGATG 
CTGGTGCGCG GCGGCCAGAT CGTGGAAGCG CGCGGCTACG TCAAGGGCGA ATGA 

 

Protein sequence

MTDASSFIFS DSASAGETAD AVRRFMAAFR HKDAAAIREL VAPDCIMEAM QPAPDGLRVE 
GQEPNVAFWQ AMIADPNGAF ETEEVVICGD RAINRWRYRF GEGQENSVRG VTLIKVRHGR 
IAEALGYAKT PAVSNLGQAG QQSTSEVIRR FNEVFQRHDP TALPELIAAD CVIENTTPAP 
NGSRHVGHDA CLALWRGIAT RPDTWFDIED VTVAGERATI RWRLHWGEDE SQSVRGVNLM 
LVRGGQIVEA RGYVKGE