9 homologs were found in PanDaTox collection
for query gene VEA_001845 on replicon NC_013456
Organism: Vibrio sp. Ex25



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013456  VEA_001845  hypothetical protein  100 
 
 
354 aa  713    Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C4730  hypothetical protein  54.57 
 
 
359 aa  298  1e-79  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.612439  normal 
 
 
-
 
NC_007974  Rmet_3749  methyl-accepting chemotaxis protein  46.52 
 
 
368 aa  280  3e-74  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2060  hypothetical protein  38.01 
 
 
334 aa  154  2.9999999999999998e-36  Pseudomonas putida W619  Bacteria  normal  0.12484  normal  0.424473 
 
 
-
 
NC_012791  Vapar_4571  hypothetical protein  32.71 
 
 
356 aa  96.7  5e-19  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3930  hypothetical protein  34.39 
 
 
465 aa  61.2  0.00000003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.756384  decreased coverage  0.0000317604 
 
 
-
 
NC_008576  Mmc1_1362  hypothetical protein  44.93 
 
 
471 aa  48.9  0.0001  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00115802  normal 
 
 
-
 
NC_008576  Mmc1_2710  hypothetical protein  44.93 
 
 
471 aa  48.9  0.0001  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000730079  normal  0.03873 
 
 
-
 
NC_011662  Tmz1t_0299  hypothetical protein  52.83 
 
 
464 aa  48.9  0.0001  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
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