| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2710 |
|---|
| Symbol | |
|---|
| ID | 4483064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3425354 |
|---|
| End bp | 3426769 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639723455 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_866609 |
|---|
| Protein GI | 117925992 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000730079 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.03873 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGTGA TAACAAGATC ATTTTCAGTG GTAGCATTGT TTGCGACGCT ACTCATTCCA
GCTGTTACAT TTTCAGCTGA AGTTGGCACG TTCAAGCACT TTTATACCGA TCCAAATTTA
ATTGGCTGGA TCGTTGCTGG AGTGTTGGCG GTAATAGCCG GTCTCGTAAT TTATTTTACC
GGAGGCACAG CCTCTCCAAT TGTTTTATCC ATTGGAACAA GCATCGGAAA TATGGCAGGG
TTATCAGGCA TTGCAGCAAC CAATTATGGG CTAGCCTTGC TTGGTGGTGG AGCCATTGCT
TCTGGCGGTT TGGGGATGGC TGGAGGAGTA GCACTTCTGA CGGCTGCTTT AACCTTCAGT
ACTGAGGTTG TGATAGACTT TACTCTCTCT CAAGTTTTTG AATCTTACAG TTACAGTAGG
CTTGTTGAGC AAAGCCAGCA TTTGCCAACA TTACCACCTC CCAGACGAAG TAAAGGCCCG
GACTCTTACC AAAAAGCAAT GAAAGCTCTG AAGCATTTTG ACGAGGAAAA TCCTATATTT
GGTGAACAAA ATCAGGCTGT TTTTCATGAT GCCATAATAA AAGTGAGGGA AAACATTGAG
GGGTTAGAGG GAAAAGAAGC AGTGCAGGTG CGTACATTGT TGGCCTACCT TTATTTTGTT
ACCCATCAAT ATCACGAGGC TGCTGAATAC GCCGATCACG CCATCAAGTA TGCAAACACG
CTTCAGATGA ATGGGACGTT ACCTGCCTTT TTGTTTGCAA CTGCATCACT CTACCAAGAG
TCAGTGGATT TCTTAGATAT CAATGAAAAC TACTTTAAGC ACTCAATTTT GTCGGAGCCA
GATAATGATC TAATACCGCT TCTTTTTTCA GTATATTTAT CCCACGTCGG CCTAAGGTAT
AGAGGTGAGA CCGCCGTTTT TTTTGAACAA ATAATGAAAA TAGCGCAACT ACCCGCTCTT
GAAGAATACA GCGATCAGAC ATTTTTCATT GTTCTGGTTA ACTACGTAAA AAGTTTGAAA
CTTGAACAAC AGAGAATTTC TTCTTTAGCC TTGTCGCAAA ACACGACCAT TCGTTCTGAT
GTAACAACAT TGGGTAGAGT TCAGAAGGCG TTAATTGAGT ACAGGAGGCT GATAGATGGG
GCGCAGGCCA TTTTAGTTGT TCTTTCAAGC TTGGAAGAGC TAGATTCTGA AATTGAAGAA
CAAATTGAAG AGATGAAGAC TTTGATAGCC AATTATCATA ATGATACCAA GCGATTAGTT
GAAGACGTCG CTGCATTAAA AGCTCACCAG GAGGGGACTT TACAGCAGGA GCATAAAACC
ACTCGCTTGT TTCTACTTTT ACTTCTGCTA ACAATCATTG GTGTAGTTTC CTTCCGAATT
TTCTTTATGA ACAGAAAACT GAAGAACACC CCATAA
|
|---|
| Protein sequence | MKVITRSFSV VALFATLLIP AVTFSAEVGT FKHFYTDPNL IGWIVAGVLA VIAGLVIYFT
GGTASPIVLS IGTSIGNMAG LSGIAATNYG LALLGGGAIA SGGLGMAGGV ALLTAALTFS
TEVVIDFTLS QVFESYSYSR LVEQSQHLPT LPPPRRSKGP DSYQKAMKAL KHFDEENPIF
GEQNQAVFHD AIIKVRENIE GLEGKEAVQV RTLLAYLYFV THQYHEAAEY ADHAIKYANT
LQMNGTLPAF LFATASLYQE SVDFLDINEN YFKHSILSEP DNDLIPLLFS VYLSHVGLRY
RGETAVFFEQ IMKIAQLPAL EEYSDQTFFI VLVNYVKSLK LEQQRISSLA LSQNTTIRSD
VTTLGRVQKA LIEYRRLIDG AQAILVVLSS LEELDSEIEE QIEEMKTLIA NYHNDTKRLV
EDVAALKAHQ EGTLQQEHKT TRLFLLLLLL TIIGVVSFRI FFMNRKLKNT P
|
|---|
| |