10 homologs were found in PanDaTox collection
for query gene Tcr_2093 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007520  Tcr_2073  hypothetical protein  100 
 
 
991 aa  2042    Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2093  hypothetical protein  100 
 
 
991 aa  2042    Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_49670  hypothetical protein  21.16 
 
 
1041 aa  80.9  0.0000000000001  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2849  hypothetical protein  27.89 
 
 
589 aa  78.6  0.0000000000005  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1103  integrase family protein  24.8 
 
 
1053 aa  70.5  0.0000000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0496625  normal 
 
 
-
 
NC_011663  Sbal223_2131  phage integrase family protein  25.27 
 
 
1039 aa  67  0.000000001  Shewanella baltica OS223  Bacteria  normal  0.075091  normal  0.99757 
 
 
-
 
NC_008577  Shewana3_2020  phage integrase family protein  23.57 
 
 
1037 aa  67  0.000000002  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00692434  decreased coverage  0.000000092621 
 
 
-
 
NC_007969  Pcryo_0912  phage integrase  24.43 
 
 
1150 aa  57  0.000002  Psychrobacter cryohalolentis K5  Bacteria  normal  0.745248  normal  0.743177 
 
 
-
 
NC_009052  Sbal_2312  phage integrase family protein  22.71 
 
 
1013 aa  57  0.000002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2354  phage integrase family protein  22.57 
 
 
1030 aa  54.7  0.000008  Shewanella sp. ANA-3  Bacteria  normal  0.322733  decreased coverage  0.0000760795 
 
 
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