8 homologs were found in PanDaTox collection
for query gene Shewana3_2020 on replicon NC_008577
Organism: Shewanella sp. ANA-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008577  Shewana3_2020  phage integrase family protein  100 
 
 
1037 aa  2130    Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00692434  decreased coverage  0.000000092621 
 
 
-
 
NC_011663  Sbal223_2131  phage integrase family protein  57.84 
 
 
1039 aa  1221    Shewanella baltica OS223  Bacteria  normal  0.075091  normal  0.99757 
 
 
-
 
NC_013889  TK90_1103  integrase family protein  27.44 
 
 
1053 aa  90.1  2e-16  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0496625  normal 
 
 
-
 
NC_010814  Glov_2849  hypothetical protein  30.12 
 
 
589 aa  82  0.00000000000005  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2073  hypothetical protein  23.57 
 
 
991 aa  67  0.000000002  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2093  hypothetical protein  23.57 
 
 
991 aa  67  0.000000002  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1885  prophage LambdaSa2, site-specific recombinase phage integrase family protein  31.79 
 
 
356 aa  49.7  0.0003  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2354  phage integrase family protein  24.45 
 
 
1030 aa  44.7  0.008  Shewanella sp. ANA-3  Bacteria  normal  0.322733  decreased coverage  0.0000760795 
 
 
-
 
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