Gene Tcr_2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_2093 
Symbol 
ID3761274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2312296 
End bp2315271 
Gene Length2976 bp 
Protein Length991 aa 
Translation table11 
GC content37% 
IMG OID637786841 
Producthypothetical protein 
Protein accessionYP_392356 
Protein GI78486431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACCTA AAACGCCTGA ACCATTTATT TATTCCTTTC TCATCTTCTT GTTTGAACCT 
ACACATGGCA TTGAGATTAA CTCACAGCGC TATTCCAACA TTCGCATCAA ACCCGAACAG
GTTGAAGAAT GCTTTGGAAA ATTGGATGTG GGAGTACATG TCTTAGCAAC AGCGTCTCAA
ATATATAATA TGCTCGTTGA GCAAGGTAAT ATAGAACAAC TGTGGCAACT GCACTATATT
CATGAAATCC ATAAAGTTAA TCGCATTACA AACCCCATTT CTGAACAAAA AGAGTGGCAA
CGATACCTAT TTATAGAGAC CTTACATCAA ACCTATCAAG ACGCGATTAC AGCAGTCGGA
TTTCAACCTA AATTGCTGAC TAGACAAGAA CAATCCGCCT TGATAATACT CAGTCTGCTA
TTTGATAGCG GTGTGCTAAA TCCCAAGTAC CTAATGTCCT TGCTGAGACA ACTTCATGCG
CTCGAGAATT ACCAATATTT TAAAGGGCGA TTATTTTTTG AAATTATCAC TCATTCAACT
AACCCACCAA AAAAATTCTT TATTTCCAAA CAAACTGAAG TGCTTCTCTA CCGGATAAAA
CCTTGGAAAA TGCCATTAAA AAAACAAGAT AAATCTCTTC ATAAAGATCT ACTCGAATCC
ATGCGAGCCA TCTTAAAAAA CTGGTCACTG AAGGTATCTA TTTTTCCAAC TAGCTTGCAG
GGCTGGTGCC AATGGGTGTC GCTATATCAA TCTAAATATT GGAGTCCTAT CTTACTTGCT
TGCAATAAGG GAAAGCACGT CAATCACTCC TTAAACGACT CTGCAACAAA AAGGCTGTTT
CGAACTGAAT CTAACATCCA TTCAACGATA GAATTTGATG ACGAAAGTAA TCAGAAGCAA
ACAACGTTAC GAAGCTATAC CTTTTCTGAA ATCCGGAAGG TTTTTGATAT CAATGTTGGC
AAATCAAACC ATAAAAAACA ATTTGATGAG ATAAAGGCCA AATACGCCTT ACTAGCCCCA
AAACTAAAAG ACAACTACTT GTTAATTTTA GACTGGGGAA AAAGCTATAT ACAATTAGAC
CATAAGGGTC AATTTAAGAA AAACCCTAAA CAAATACTCA AGAAAATAAG CGCAATTGGC
CGCCATCTTA TTGCGGTAGC AAACACACAG TTTTTACAAA AAATCAGCGC CGAAGAAAGA
ACCGCTATTT TTAGAGAGGT CATTGAGCAG GCCATTTCAA TAAAAAACAA AAACGACATT
CAATATCACT TACGCGACTT TAATATTTGG TTAGAAAAAT CGCATCGTTC GGAAAAAATT
CAACATAAGG AAGACGTCTT CGGCACCCCT TCTATGACCG ACATGACAGT CAATGCGAAC
CTAATCAGTT TTGATGAATA TGAATCCATA AAATCCTCAC TCACCGAGTT AATCACGAAG
TACCCAGAAG ACGAATCTTA CAAAGTCATG TTGGCTATTC TTATACTTGG GTTTAGACTT
GGACTCCGTA TAACGGAAGC CATTGAATTA AAGTTTATAG ATTATCTATT TTGTGACACA
AGTCCTCAAA TTCTGATTAG AGAAAGTGAA GAAAGAAAAA CCAAGAGCCT TAATGCAAAA
CGAGCTCAAA AACTGACGGA TTTTCTGACG GATGATGAAG TTAAATTATT GAATGAGCAT
CACCAATTCC AACAAAAACG TTTCGGCCGC TTTACAAATG GTAAAAACCA CTATTATTTC
TTTTCTACAG AAGACAGCGG CTGTAAATTA AAATCCGTAG AAGATATTAA AAAGAAGTTA
ATGCACCTTA TTCGAGAAGT ATGTAAAGAT ACCAGCCTCA AATATCACCA TTTAAGGCAC
AGTTTTGCCT CTTGGCACTT TTTCTCTTCC GCGATCTCTG AATTGGATTT AAATATCGGT
GATTACTTTG CTCACCTGCC AAAAACAGAA GCCTGGCTAC AACAAGCTAA CACTCGTAAA
CTTCAACACT TACCGACCCA GCTAAAAAGC AAAAAATACC CTTATTGGCT GGCTCAAAGA
ATTGGTCATG GTTCGATTGA AACCACTCTA GAGCATTACA TTCACAGCGT AGATCTCATT
AATATGCTTT ATCAGGATTC ATTGGTCTCC AATCTAACCA TTAACGACTT GCACGGATTA
ACTAACATTC CAATCAGCAC GTTAAAAAAA CAAAAAAATC GTTTAGATTT TGCTTTAACC
CGTCTTACAA ATTCCATTCC TAAATTAAAA GCAAAAAAAC ATCAAAGCTT ATTGAGCTTA
CGGGAAGAAT GGCTTGCGCC TGAAGAGATT CAAACGTGTA TCGAACCGAT TACTGCGAAT
CTGCCCTATT ATCGTTACAT GTCATTTCTT TACCACTCCA GCTCCACAGG CAATATTTCT
AACTTAGGGT TTACACGAAA AGAAATTAAG CAATTGACCA GATTATTTCA GGATAACCCT
GCATTTCGAA TTCGGGCTTT GAATATTGCT GAGCAATCTC TATTAGCAAG CTATTTAGAT
AAAATTATGG ATGTCTATCA ATTTACACCT AATAAAGATA CTGGGTTTCC TCGTCCCCTA
GAGGCTATTT TGGATACCTT TAAGAGCAGA CTTCATCCTT ATTCGTCAGA CACGAATAGC
TTGCAAATTC AACGCAGCTA TCACTTGATA TTTAGAGATG AAACGAGTGG AAAAATATTG
GTCGAATTTG CACAAAAAAT GAATATACCT ATAAAGCTCA TCTTAAGACA CTCTGGTCAA
ATGAAACCTT TTCATATTAC AAAAGAAAAG CGTTATTGGA AAAAGCTCTT GGGGTTAAAG
CACAGTATTG TATTTACTAC ACAAAAAGAC ACAAACTCAC GCCTAGGTAA TCATGGTCGC
CTTGAAATGG TGTTTTTAAG CAATACAGGC AAAAAAGATC ATGCTTTGTA TTTCTTACTT
GTAATGTTAA ATGTAGCTAG TCTATGGCAG TCATAA
 
Protein sequence
MPPKTPEPFI YSFLIFLFEP THGIEINSQR YSNIRIKPEQ VEECFGKLDV GVHVLATASQ 
IYNMLVEQGN IEQLWQLHYI HEIHKVNRIT NPISEQKEWQ RYLFIETLHQ TYQDAITAVG
FQPKLLTRQE QSALIILSLL FDSGVLNPKY LMSLLRQLHA LENYQYFKGR LFFEIITHST
NPPKKFFISK QTEVLLYRIK PWKMPLKKQD KSLHKDLLES MRAILKNWSL KVSIFPTSLQ
GWCQWVSLYQ SKYWSPILLA CNKGKHVNHS LNDSATKRLF RTESNIHSTI EFDDESNQKQ
TTLRSYTFSE IRKVFDINVG KSNHKKQFDE IKAKYALLAP KLKDNYLLIL DWGKSYIQLD
HKGQFKKNPK QILKKISAIG RHLIAVANTQ FLQKISAEER TAIFREVIEQ AISIKNKNDI
QYHLRDFNIW LEKSHRSEKI QHKEDVFGTP SMTDMTVNAN LISFDEYESI KSSLTELITK
YPEDESYKVM LAILILGFRL GLRITEAIEL KFIDYLFCDT SPQILIRESE ERKTKSLNAK
RAQKLTDFLT DDEVKLLNEH HQFQQKRFGR FTNGKNHYYF FSTEDSGCKL KSVEDIKKKL
MHLIREVCKD TSLKYHHLRH SFASWHFFSS AISELDLNIG DYFAHLPKTE AWLQQANTRK
LQHLPTQLKS KKYPYWLAQR IGHGSIETTL EHYIHSVDLI NMLYQDSLVS NLTINDLHGL
TNIPISTLKK QKNRLDFALT RLTNSIPKLK AKKHQSLLSL REEWLAPEEI QTCIEPITAN
LPYYRYMSFL YHSSSTGNIS NLGFTRKEIK QLTRLFQDNP AFRIRALNIA EQSLLASYLD
KIMDVYQFTP NKDTGFPRPL EAILDTFKSR LHPYSSDTNS LQIQRSYHLI FRDETSGKIL
VEFAQKMNIP IKLILRHSGQ MKPFHITKEK RYWKKLLGLK HSIVFTTQKD TNSRLGNHGR
LEMVFLSNTG KKDHALYFLL VMLNVASLWQ S