29 homologs were found in PanDaTox collection
for query gene Tcr_2023 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007520  Tcr_2023  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like  100 
 
 		 294 aa  608  1e-173  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
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NC_013422  Hneap_1817  putative lipoprotein  34.51 
 
 		 297 aa  173  2.9999999999999996e-42  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
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NC_007912  Sde_0403  ABC-type nitrate/sulfonate/bicarbonate transport system protein  27.8 
 
 		 328 aa  68.6  0.0000000001  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
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NC_008700  Sama_0066  ABC-type nitrate/sulfonate/bicarbonate transport system protein  23.66 
 
 		 316 aa  68.2  0.0000000002  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
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NC_009092  Shew_3789  ABC-type nitrate/sulfonate/bicarbonate transport system protein  22.9 
 
 		 320 aa  68.2  0.0000000002  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
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NC_011901  Tgr7_1989  nitrate/sulfonate/bicarbonate ABC transporter  24.03 
 
 		 339 aa  65.1  0.000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.553257  n/a   
 
 
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NC_009831  Ssed_0291  ABC-type nitrate/sulfonate/bicarbonate transport system protein  24.82 
 
 		 320 aa  61.6  0.00000001  Shewanella sediminis HAW-EB3  Bacteria  normal  1  hitchhiker  0.00000806858 
 
 
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NC_007644  Moth_0465  ABC transporter, substrate-binding protein, aliphatic sulphonates  20.82 
 
 		 347 aa  61.2  0.00000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.176308  normal  1 
 
 
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NC_013440  Hoch_3202  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  24.76 
 
 		 346 aa  60.5  0.00000003  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.0579972 
 
 
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NC_008576  Mmc1_2535  ABC-type nitrate/sulfonate/bicarbonate transport system protein  23.83 
 
 		 333 aa  60.8  0.00000003  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.0754711 
 
 
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NC_010506  Swoo_4644  NMT1/THI5-like domain-containing protein  25.36 
 
 		 318 aa  60.1  0.00000004  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
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NC_007520  Tcr_1088  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like  23.9 
 
 		 329 aa  58.9  0.00000009  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.212665  n/a   
 
 
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NC_013223  Dret_1647  putative sulfonate/nitrate transport system substrate-binding protein  20.66 
 
 		 324 aa  58.5  0.0000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
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NC_008740  Maqu_3665  substrate-binding protein involved in ABC-type nitrate/sulfonate/bicarbonate transport system  24.44 
 
 		 318 aa  53.5  0.000004  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
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NC_010512  Bcenmc03_6433  ABC transport system substrate-binding protein  20.94 
 
 		 340 aa  48.9  0.00009  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
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NC_010172  Mext_3730  ABC transport system substrate-binding protein  20.26 
 
 		 336 aa  47.8  0.0002  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.201225 
 
 
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NC_011757  Mchl_4025  ABC transport system substrate-binding protein  20.69 
 
 		 336 aa  48.1  0.0002  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012880  Dd703_2645  Substrate-binding region of ABC-type glycine betaine transport system  23.49 
 
 		 320 aa  48.1  0.0002  Dickeya dadantii Ech703  Bacteria  normal  0.202001  n/a   
 
 
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NC_007947  Mfla_2561  NLPA lipoprotein  35.71 
 
 		 339 aa  46.2  0.0006  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  0.79068 
 
 
-
 
NC_007952  Bxe_B1377  nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein  19.21 
 
 		 329 aa  45.8  0.0008  Burkholderia xenovorans LB400  Bacteria  normal  0.358866  hitchhiker  0.00572107 
 
 
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NC_008544  Bcen2424_5927  ABC transport system substrate-binding protein  20 
 
 		 340 aa  45.4  0.001  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_3016  ABC-type nitrate/sulfonate/bicarbonate transport system protein  27.36 
 
 		 351 aa  45.4  0.001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
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NC_008062  Bcen_5562  ABC transport system substrate-binding protein  20 
 
 		 340 aa  45.4  0.001  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.575813  n/a   
 
 
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NC_007298  Daro_0081  ABC transport system substrate-binding protein  19.91 
 
 		 332 aa  45.1  0.001  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B4888  ABC transporter, substrate-binding protein, aliphatic sulphonates  19.82 
 
 		 339 aa  44.7  0.002  Ralstonia eutropha JMP134  Bacteria  normal  0.108184  n/a   
 
 
-
 
NC_011901  Tgr7_3081  NMT1/THI5 like domain protein  25.31 
 
 		 326 aa  44.3  0.002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_0050  ABC transporter periplasmic binding protein, urea carboxylase region  24.19 
 
 		 351 aa  43.1  0.005  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
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NC_010725  Mpop_3908  ABC transport system substrate-binding protein  20.44 
 
 		 336 aa  43.1  0.006  Methylobacterium populi BJ001  Bacteria  normal  0.074485  normal  0.0880082 
 
 
-
 
NC_014248  Aazo_3527  ABC-type nitrate/sulfonate/bicarbonate transporter protein  23.03 
 
 		 328 aa  42.7  0.007  'Nostoc azollae' 0708  Bacteria  normal  0.304801  n/a   
 
 
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