Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1647 |
Symbol | |
ID | 8419478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1897174 |
End bp | 1898148 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645038221 |
Product | putative sulfonate/nitrate transport system substrate-binding protein |
Protein accession | YP_003198509 |
Protein GI | 258405767 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCC GCCGAATTGT TCTGTTTGTT GTCCTGCTCT GTCTTTTCAG CGCCGGTGGC GCGATGGCTG AAATGACACC GGTCCGCCTG GCCCACGCCA CCTGGGTGGG GTATGGACCG TTGTATATCG CCCAGGAAAA CGGGTATTTC GAAGACGAAA ATATCGATAT GGACCTCTTT ATCATCGAGG ACGAGGCCCA GTACGCTGCC GCGTTGGCCT CGGGCAATAT CGACGGCCTG GGCAACGTCA TCGACCGTGA AGTCATCCAC TTCGCCAAAG GGACTTCGGA AGTGGTTGTC TTTGCCATGG ATGAATCCGC CGGCGGGGAC GGGATCATCG CCACTGAGGA GATCCAGAGT GTTGCGGATC TGGCCGGCAA GGACATCGGC CTCGACAAAT CCTCGACCTC CTATTTCTTT TTCTTGAGTA TCCTGGATAA ATACGGTGTC GACGAGCAGT CCATGACCTT CCACGAGATG GGCTCCTCCA ACGCTGGCGC GGCTTTTGTG GCCGGCAAGC TCGATGCCGC AGTGACCTGG GAGCCTTGGC TCTCCAAGAG CGATCAGCGC GAGGGCGGCC ACGTGCTCAT TTCCAGTGCG GAGATGCCCA AGACTATTGT CGATGTCGTG GTTCTCAACA GCGACTTCGT GGCCGAGCAC CCTCAGGTCC CCGCCGGTCT GACCCGGTCC TGGTTCCGGG CCATTGACTG GTATCGAGCC CATCCTGACA AGGGCAATGC CATTATGGCC GAGGCGATGG GGCTCAGTAC CGAAGAGATG GCCAGCATGG CCGAAGGGGT CCGCTTTATC GGCGAAAAGG GGAACAAAAC GTTTTTTGAC CCCTCGACCT CCGGCAATAT TTACGAGGTG GCAGACCGGG CCCTGGATTT CTGGCGCTCG AAGGGCATTA TCCAATCGCC GGTCAAGGCC GAGGAATTGG TGACCTCCGA ATACGTCAAC CAGGTTGCTG ACTAG
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Protein sequence | MPIRRIVLFV VLLCLFSAGG AMAEMTPVRL AHATWVGYGP LYIAQENGYF EDENIDMDLF IIEDEAQYAA ALASGNIDGL GNVIDREVIH FAKGTSEVVV FAMDESAGGD GIIATEEIQS VADLAGKDIG LDKSSTSYFF FLSILDKYGV DEQSMTFHEM GSSNAGAAFV AGKLDAAVTW EPWLSKSDQR EGGHVLISSA EMPKTIVDVV VLNSDFVAEH PQVPAGLTRS WFRAIDWYRA HPDKGNAIMA EAMGLSTEEM ASMAEGVRFI GEKGNKTFFD PSTSGNIYEV ADRALDFWRS KGIIQSPVKA EELVTSEYVN QVAD
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