| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0291 |
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| Symbol | |
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| ID | 5611525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 342492 |
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| End bp | 343454 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931123 |
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| Product | ABC-type nitrate/sulfonate/bicarbonate transport system protein |
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| Protein accession | YP_001472032 |
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| Protein GI | 157373432 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000806858 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCATGA TAAAATACTT GGCCAGCCTT CTTATTACCC TCATGCTAAC AGCTTGCGGT
GGCGAGAAAC CTCAACCGCA AATAACCATC GCGATTAACC CATGGCCAGG CTATGAATTG
CTCTATTTAG CCGAAAAGAA AGGCTTCTTC GAAAAAGTAG GCATCAATAT AAAACTGGTA
CAAACCGCCA CCTTATCGGA CGCTCAACGG GCCTACATCA ATGGGCGAGT CGATGGTTTT
ACCAGTACCA TAGTGGAAGC CGTTCAGGCG CAGGAGTTTG GAGGAGAACC ATTAACCATT
GCACTACTCG CCGACTATTC AAACGGTGGC GATGTGATTT TAGGGAGTGA GTCGTTTCAA
TCCATTACCG ATTTAAAGGG TAAGAAAGTA GGTTGTGAGG TCAGCTCTCT CGGGATCTAC
ATCTTGGCAA GAGCGTTAGC GGTATCGGAC ATGTCGCTCG ATGATGTTCA AATTGTGAAT
ATGGAACAGG GAAATGCCCA TCAAGCGTTA GCCTATGGAC AGATAGACGC CATGGTTACC
TACCCTCCCT ACTCTTTCGA TATTCTAAAT GACAAGAAGC TCGCAAGCCA TCGGATATTC
ACGACAGCTG AGATCCCCAA CGAAATTCTC GATACTGTAT CTCTATCGAA AGGGGTCATT
GCCCGAAATC CAAAGTTAAC CTCTCAACTG CAACAAGCTT GGCAACTGGC AATGGATTAT
CTGGAACAGC ATCCGGAAGA GGCCGTAAAG CACATGGCTG AACGGGAACA GATCTCAGAA
ATCGAATTTA ACCAGGCGCT CAGCGATATT CACCTGTTAT CCAGCATGGA ACAAAAGCAA
CTACTCAAAG ATAAAGAGAA GCTTACTAAG CTTTCAAAGT CGGTTTGCAA CACGCTCAAT
CAAGTTGGTG CCTTTAATAG CTCCTGTCTA CATGTTGAAT CTCTGTTTCA CTCAGGCATT
TAG
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| Protein sequence | MTMIKYLASL LITLMLTACG GEKPQPQITI AINPWPGYEL LYLAEKKGFF EKVGINIKLV
QTATLSDAQR AYINGRVDGF TSTIVEAVQA QEFGGEPLTI ALLADYSNGG DVILGSESFQ
SITDLKGKKV GCEVSSLGIY ILARALAVSD MSLDDVQIVN MEQGNAHQAL AYGQIDAMVT
YPPYSFDILN DKKLASHRIF TTAEIPNEIL DTVSLSKGVI ARNPKLTSQL QQAWQLAMDY
LEQHPEEAVK HMAEREQISE IEFNQALSDI HLLSSMEQKQ LLKDKEKLTK LSKSVCNTLN
QVGAFNSSCL HVESLFHSGI
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