16 homologs were found in PanDaTox collection
for query gene Tbd_2652 on replicon NC_007404
Organism: Thiobacillus denitrificans ATCC 25259



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007404  Tbd_2652  nitrogen regulatory protein P-II  100 
 
 
108 aa  218  3e-56  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0878  nitrogen regulatory protein P-II  82.24 
 
 
108 aa  184  5e-46  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_0906  nitrogen regulatory protein P-II  77.78 
 
 
111 aa  174  3e-43  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007959  Nham_4043  nitrogen regulatory protein P-II (GlnB, GlnK)  72.64 
 
 
108 aa  163  6.9999999999999995e-40  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007959  Nham_4324  nitrogen regulatory protein P-II (GlnB, GlnK)  72.64 
 
 
108 aa  162  1.0000000000000001e-39  Nitrobacter hamburgensis X14  Bacteria  normal  0.913488  n/a   
 
 
-
 
NC_007959  Nham_4330  nitrogen regulatory protein P-II (GlnB, GlnK)  72.64 
 
 
108 aa  162  1.0000000000000001e-39  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_1989  hypothetical protein  71.7 
 
 
108 aa  159  2e-38  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0168158  normal 
 
 
-
 
NC_007406  Nwi_2931  nitrogen regulatory protein P-II  66.98 
 
 
119 aa  154  3e-37  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.762572 
 
 
-
 
NC_006368  lpp0279  hypothetical protein  38.46 
 
 
117 aa  98.2  3e-20  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0274  hypothetical protein  38.46 
 
 
117 aa  98.2  3e-20  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007778  RPB_3831  nitrogen regulatory protein P-II (GlnB, GlnK)  32.32 
 
 
103 aa  55.5  0.0000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.218174  normal 
 
 
-
 
NC_007413  Ava_2951  nitrogen regulatory protein P-II (GlnB, GlnK)  34.02 
 
 
103 aa  53.1  0.000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_3238  hypothetical protein  28.87 
 
 
103 aa  50.8  0.000006  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.546028  normal 
 
 
-
 
NC_007802  Jann_0110  nitrogen regulatory protein P-II  27.84 
 
 
103 aa  47  0.0001  Jannaschia sp. CCS1  Bacteria  normal  0.762819  normal 
 
 
-
 
NC_010424  Daud_1968  hypothetical protein  27 
 
 
105 aa  44.7  0.0005  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0233024  n/a   
 
 
-
 
NC_007413  Ava_2164  nitrogen regulatory protein P-II (GlnB, GlnK)  27.08 
 
 
97 aa  41.6  0.004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.216053 
 
 
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