8 homologs were found in PanDaTox collection
for query gene TM1040_3589 on replicon NC_008043
Organism: Ruegeria sp. TM1040



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008043  TM1040_3589  sporulation related  100 
 
 
304 aa  602  1.0000000000000001e-171  Ruegeria sp. TM1040  Bacteria  normal  normal  0.428008 
 
 
-
 
NC_007802  Jann_1279  putative lipoprotein  53 
 
 
298 aa  240  2e-62  Jannaschia sp. CCS1  Bacteria  normal  0.288589  normal  0.952395 
 
 
-
 
NC_009952  Dshi_0924  sporulation domain protein  50 
 
 
268 aa  216  2.9999999999999998e-55  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_2200  sporulation domain-containing protein  41.09 
 
 
260 aa  168  9e-41  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.188626  normal 
 
 
-
 
NC_007493  RSP_0549  hypothetical protein  40.73 
 
 
260 aa  167  2e-40  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1238  sporulation domain-containing protein  65.59 
 
 
251 aa  128  1.0000000000000001e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.192754  normal 
 
 
-
 
NC_007519  Dde_0531  rare lipoprotein A  32.31 
 
 
370 aa  43.5  0.004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.863608  n/a   
 
 
-
 
NC_008789  Hhal_1800  sporulation domain-containing protein  28.17 
 
 
210 aa  42.7  0.008  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>