Gene TM1040_3589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3589 
Symbol 
ID4075516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp637924 
End bp638838 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content62% 
IMG OID638005108 
Productsporulation related 
Protein accessionYP_611818 
Protein GI99078560 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.428008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGC AGGACACGCG CATGAAAGAC AAGGTTTCTG GCCCGGCGAG ACTTCAGAGA 
TTGGTTCCCA GTGGCGCGAT CCTTGCGCTA ACTGGCGCAT TGGTTCTTGC GGGCTGCGAA
GAGGGCGCCA ATCTGCCGTT CCTTCAGCCC AAGGACAATG CTGAACAAGG CCTGCCCAGC
AATTCCACTA AGCTTGTAGA GCGCGATGTC GAAGCCCCGG ATGTCTTTCA GGTGACCGAA
GCTGGCCTGT GGGACGGTCG CCCCTCAATC GGTGGGGTCT GGGTGGCGCA TCCAGACGTG
AAAGATCCCG AGCGGGTGAT CATTCGCAAC AATGCCAACG GCAAATTCGT CATTGGGGCC
CTGTTCCGGC GCGAGCGGGC GATTCCGGGA CCGCGCCTGC AGGTATCTTC GGATGCGGCG
GCAGCCCTGT CCATGCTGGC GGGCGCGCCT GTGGAACTGA ATGTCACGGC CCTGCGCCGC
GAGGCCGTCG AGGACATCCC GCCTGAGGCT GAGATCCCTG AAATTGAGGG GCTTGAAGAG
CAGCCACAGG TTGCAGAAAC GGCGGCGGTG GAGACACAAG CGCTGGATCC AATTGCCGGT
GGTGCAGCCG CTGCCATCGA GGCCGCGGCA CCCGCACCCG AGCCTGCCCC TGCGGCGCCA
ACGCCATCTG CTCGATCTGC CTTGGCAAAG CCATACATTC AGATTGGTAT TTTTAGCGTC
GAGGCCAACG CCAAACGCAC CGCCGACCAG ATGCGCAATG CGGGGATCAT CCCAACAGTC
TATGAGCAGT CTTCCAACGG CAAGGCGTTC TGGCGCGTGG TGGTCGGGCC CGCTCAGTCC
AAAGGAGAGC GGACTCAGCT CCTGAAGGCG GTCAAGGCCG CTGGTTTTGC CGACGCCTAT
GCCGTGACAA ACTGA
 
Protein sequence
MSRQDTRMKD KVSGPARLQR LVPSGAILAL TGALVLAGCE EGANLPFLQP KDNAEQGLPS 
NSTKLVERDV EAPDVFQVTE AGLWDGRPSI GGVWVAHPDV KDPERVIIRN NANGKFVIGA
LFRRERAIPG PRLQVSSDAA AALSMLAGAP VELNVTALRR EAVEDIPPEA EIPEIEGLEE
QPQVAETAAV ETQALDPIAG GAAAAIEAAA PAPEPAPAAP TPSARSALAK PYIQIGIFSV
EANAKRTADQ MRNAGIIPTV YEQSSNGKAF WRVVVGPAQS KGERTQLLKA VKAAGFADAY
AVTN