Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1800 |
Symbol | |
ID | 4711019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1972217 |
End bp | 1972849 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639856270 |
Product | sporulation domain-containing protein |
Protein accession | YP_001003366 |
Protein GI | 121998579 |
COG category | [S] Function unknown |
COG ID | [COG3147] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCCAA GCACGAAACG ACAGTTGGTT GGGGCCGCGG TCCTGGTCGC CCTGGCCGTG ATCTTCCTGC CGATGATCTT CTCCGGCTCC GATGAGGCCG AGGACGTGGA TGTGCCGGTC GAGGTTCCGC CCCGCCCCGA CGATCAGCCG GAACCCGAGG AGCTGGCCGA GCAGCCGCCG GAGGATCTCG ACGAGGAGCC GGAAGATTTC ACCGCCGAGG AGCCGGCCGG ATTCGAGGAG CCGGAGGCCT CGGATGACGA GCCGGCCAGC CCCGACGAGC CCGAACGGGA CGAGGATGAG GAGCAGGCGC GGGACGAGCC CGAGGAGACC GCCACCGAGG ACGAAACCAC CGACGAGGCG GTCGACGAGG TGAACGGCAT CGCCATCGCC AGTCGGGAGC AGGGGGCGTA CTCGGTCCAG GTGGGCAGTT TCCAGGAGGC AGAGAACGCC GAGCGGGAGC GCGACCGCAT CCGCGATCTC GGGTTGCCGG CCTACATCGA GTCGCCGGAC GGCGAGGGGT CGTCGTTCCA CCGTGTGCGC ATCGGTCCGG TCATGGAGCG GGACGAGGCG CAGGCGTTGC TCGAGCGCGC CGCTGACGAG GCCGGGGTGG AGGGGTACGT GGTGTCGCGA TGA
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Protein sequence | MDPSTKRQLV GAAVLVALAV IFLPMIFSGS DEAEDVDVPV EVPPRPDDQP EPEELAEQPP EDLDEEPEDF TAEEPAGFEE PEASDDEPAS PDEPERDEDE EQARDEPEET ATEDETTDEA VDEVNGIAIA SREQGAYSVQ VGSFQEAENA ERERDRIRDL GLPAYIESPD GEGSSFHRVR IGPVMERDEA QALLERAADE AGVEGYVVSR
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