Gene Hhal_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1800 
Symbol 
ID4711019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1972217 
End bp1972849 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content70% 
IMG OID639856270 
Productsporulation domain-containing protein 
Protein accessionYP_001003366 
Protein GI121998579 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCCAA GCACGAAACG ACAGTTGGTT GGGGCCGCGG TCCTGGTCGC CCTGGCCGTG 
ATCTTCCTGC CGATGATCTT CTCCGGCTCC GATGAGGCCG AGGACGTGGA TGTGCCGGTC
GAGGTTCCGC CCCGCCCCGA CGATCAGCCG GAACCCGAGG AGCTGGCCGA GCAGCCGCCG
GAGGATCTCG ACGAGGAGCC GGAAGATTTC ACCGCCGAGG AGCCGGCCGG ATTCGAGGAG
CCGGAGGCCT CGGATGACGA GCCGGCCAGC CCCGACGAGC CCGAACGGGA CGAGGATGAG
GAGCAGGCGC GGGACGAGCC CGAGGAGACC GCCACCGAGG ACGAAACCAC CGACGAGGCG
GTCGACGAGG TGAACGGCAT CGCCATCGCC AGTCGGGAGC AGGGGGCGTA CTCGGTCCAG
GTGGGCAGTT TCCAGGAGGC AGAGAACGCC GAGCGGGAGC GCGACCGCAT CCGCGATCTC
GGGTTGCCGG CCTACATCGA GTCGCCGGAC GGCGAGGGGT CGTCGTTCCA CCGTGTGCGC
ATCGGTCCGG TCATGGAGCG GGACGAGGCG CAGGCGTTGC TCGAGCGCGC CGCTGACGAG
GCCGGGGTGG AGGGGTACGT GGTGTCGCGA TGA
 
Protein sequence
MDPSTKRQLV GAAVLVALAV IFLPMIFSGS DEAEDVDVPV EVPPRPDDQP EPEELAEQPP 
EDLDEEPEDF TAEEPAGFEE PEASDDEPAS PDEPERDEDE EQARDEPEET ATEDETTDEA
VDEVNGIAIA SREQGAYSVQ VGSFQEAENA ERERDRIRDL GLPAYIESPD GEGSSFHRVR
IGPVMERDEA QALLERAADE AGVEGYVVSR