5 homologs were found in PanDaTox collection
for query gene TM1040_1683 on replicon NC_008044
Organism: Ruegeria sp. TM1040



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008044  TM1040_1683  hypothetical protein  100 
 
 
89 aa  184  3e-46  Ruegeria sp. TM1040  Bacteria  normal  normal  0.676398 
 
 
-
 
NC_007484  Noc_2744  hypothetical protein  38.16 
 
 
80 aa  63.2  0.000000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0843  hypothetical protein  32.89 
 
 
84 aa  53.1  0.000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2097  hypothetical protein  31.88 
 
 
80 aa  45.8  0.0002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.255488 
 
 
-
 
NC_009253  Dred_2427  hypothetical protein  37.14 
 
 
83 aa  43.1  0.001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
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