Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1683 |
Symbol | |
ID | 4078259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1779945 |
End bp | 1780214 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638006996 |
Product | hypothetical protein |
Protein accession | YP_613678 |
Protein GI | 99081524 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.676398 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCTA AAAAATCACT CTTGGAGCGA ATGCGCGCGA ACCCTCGCGA TGACTGGACA ATTACCCAAG TCGAAACGCT ATGCAAAAAA ATTGGACTAG ACGTCCGGAA GCCAAACGGT AGCAGTCACT ACGTTGTGTC GAGCAAATAC TTGCGCGACT CACTCTGCGT GCCCTACAAG CGCCCGATTA GGGCACTATA TATTAAGAAC CTTGTGAGCT ACTCTGACGC CCACGCCGAA ATGCAATCTA AGGATAGCAG TAATGTCTGA
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Protein sequence | MAPKKSLLER MRANPRDDWT ITQVETLCKK IGLDVRKPNG SSHYVVSSKY LRDSLCVPYK RPIRALYIKN LVSYSDAHAE MQSKDSSNV
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