Gene TM1040_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1683 
Symbol 
ID4078259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1779945 
End bp1780214 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content50% 
IMG OID638006996 
Producthypothetical protein 
Protein accessionYP_613678 
Protein GI99081524 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.676398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCTA AAAAATCACT CTTGGAGCGA ATGCGCGCGA ACCCTCGCGA TGACTGGACA 
ATTACCCAAG TCGAAACGCT ATGCAAAAAA ATTGGACTAG ACGTCCGGAA GCCAAACGGT
AGCAGTCACT ACGTTGTGTC GAGCAAATAC TTGCGCGACT CACTCTGCGT GCCCTACAAG
CGCCCGATTA GGGCACTATA TATTAAGAAC CTTGTGAGCT ACTCTGACGC CCACGCCGAA
ATGCAATCTA AGGATAGCAG TAATGTCTGA
 
Protein sequence
MAPKKSLLER MRANPRDDWT ITQVETLCKK IGLDVRKPNG SSHYVVSSKY LRDSLCVPYK 
RPIRALYIKN LVSYSDAHAE MQSKDSSNV