10 homologs were found in PanDaTox collection
for query gene TM1040_1142 on replicon NC_008044
Organism: Ruegeria sp. TM1040



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008044  TM1040_1142  hypothetical protein  100 
 
 		 519 aa  1000    Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.0823689 
 
 
-
 
NC_009049  Rsph17029_0713  protein of unknown function DUF610, YibQ  43.41 
 
 		 477 aa  154  2.9999999999999998e-36  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.106897 
 
 
-
 
NC_007802  Jann_1881  protein of unknown function DUF610, YibQ  40.78 
 
 		 575 aa  148  3e-34  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.176772 
 
 
-
 
NC_009428  Rsph17025_3100  protein of unknown function DUF610, YibQ  39.09 
 
 		 474 aa  147  4.0000000000000006e-34  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.482239 
 
 
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NC_007493  RSP_2003  YibQ protein  43.23 
 
 		 477 aa  146  9e-34  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009952  Dshi_1797  hypothetical protein  35.78 
 
 		 608 aa  117  3.9999999999999997e-25  Dinoroseobacter shibae DFL 12  Bacteria  decreased coverage  0.0000479521  normal  0.132264 
 
 
-
 
NC_008751  Dvul_0924  protein of unknown function DUF610, YibQ  27.27 
 
 		 461 aa  45.4  0.002  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  0.453399 
 
 
-
 
NC_011146  Gbem_1253  protein of unknown function DUF610 YibQ  28.27 
 
 		 317 aa  45.1  0.003  Geobacter bemidjiensis Bem  Bacteria  normal  0.0322515  n/a   
 
 
-
 
NC_012918  GM21_3030  protein of unknown function DUF610 YibQ  28.27 
 
 		 316 aa  44.7  0.004  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
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NC_011769  DvMF_3159  protein of unknown function DUF610 YibQ  27.35 
 
 		 543 aa  44.3  0.005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0142078 
 
 
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