| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1142 |
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| Symbol | |
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| ID | 4078438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1227757 |
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| End bp | 1229316 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638006446 |
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| Product | hypothetical protein |
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| Protein accession | YP_613137 |
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| Protein GI | 99080983 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2861] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0823689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGCG CGCGTGAGAA AGAGCACAGG CGAGAAGGCG AAACAGGCAT GCGAGGATTT
CTGGGTGGCG TGAGCGTAGG GGCGCTGGTC GCAGTTGCGG GGGCGGCGGT GTGGTCGCTG
TCGACGCCAT TGCCGCAGGC GGTCGATGTC TCGCAGGAAC TGCCCGTCAC AACATTGCAG
CCGCGTGAGG TTCCAGCGCC CCCGTCCGAT GTGCCCGGAA GCGACGCAGA TCTGGTTGAG
GCCGCCCCAG CGGAACCCGA TGCAAATGCC CTTGGCCGAG ACAGCGCCCC AGATGAGATC
GACACTTCGC TGCCAGAGCG TCCCAGCGTT TCGACCGATC CCGAGGTCAC ATTGGATGGC
GCCCCGGTTC AGAGCGACAC CCCCCGGATT GCGGTGACTT CCGATGCGGA TGCGCCCGTG
TCTGGTGGCG ATGACAGCAT CCGCCCTGAG GCGCCCTCGC AAGACACCAC ACCGGATCTG
GGAGCAGATT CCGCCACACG GCCCGAGGTT TCGGCGGCCT CAGACCTGCC ACTGCAGGCG
CCAGACGCGG AAATCCCCAC CCCCGATCTG TCGACCGAGG CCGATCCGGC GCCCCTGCGC
CAGGAGACGC TTCAAGTGGA GGCGCCAGAT ATCGGCACGC CTCCGGATGT GACCGCGTCG
CCCGTGTTGA CCACTCCGCC CGTGCGGTCG CTCACCCCTT CTGATCCGGT CGAGGACAAC
GCGGGGGCAA ATGGGGGCGT GAGAATCGCG GATCTGCCGC AGGCCTCCGA GGACCCAGAG
ACAAATGCAG GACCCAGTAT CGGCACGCGC GTGCTGCCAC TGACAGAACG CGACACCACG
GGCGCGGATG CGTCTTCTGC AGCAGACAGT AGTGCTGCGC CCTTTGTGCG CAACAGCGAG
CCGGCAAACC CGGAGCCGGG CCTGCCCTTG ATGTCGATTG TCCTCGTCGA AGAAGAAGGC
GCGGTGGGCG CCGAGGCGCT TGAGGATTTC CCCTATCCGC TGACGTTTAC CATCGACCCG
AGCGACCCGG ATGCGGTGGC ACGCATGAAA GCCCGGCGCG CGGCGGGGTT TGAGGTCATG
GTGTTGGCGG ATCTGCCCCG CGAAGGCCAG CCGCAGGACG CCGAAACCGC GATGCCGGTG
TGGTTTGACC GCCTTCCAGA GGCGGTGGGC ATCCTTGAGG GCATCGACAG CGGCGTGCAG
GGCAACCGGG CGCTTGCGGA TCAGGTGGCC AGCATCGCCG GTGATCTGGG CTATGGGCTG
GTGCTACAGG ACAATGGCCT GAACACGGTC CACAAAATGG CGCTGCGCGA TGGTATTCCT
TCGGGCGTGG TGTTTCGCGA CTTTGACGGC GCGGGTCAGG ACCCGCGCGC CATGCGCCGT
TTTCTGGACC AGGCCGCGTT CCGCTCCGGT CAGGAGGGCG CGGTCATCAT GCTGGGACGT
CTGAAGCCGG ACACGATTTC CGCGCTGCTG ATCTGGGGGC TGCAAGACCG CGCCAGCAGC
GTGGCGCTGG TGCCGATCTC GACCAGTCTC AAACGCCTGC TGGAGCCGGT CTCAAACTAA
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| Protein sequence | MGGAREKEHR REGETGMRGF LGGVSVGALV AVAGAAVWSL STPLPQAVDV SQELPVTTLQ
PREVPAPPSD VPGSDADLVE AAPAEPDANA LGRDSAPDEI DTSLPERPSV STDPEVTLDG
APVQSDTPRI AVTSDADAPV SGGDDSIRPE APSQDTTPDL GADSATRPEV SAASDLPLQA
PDAEIPTPDL STEADPAPLR QETLQVEAPD IGTPPDVTAS PVLTTPPVRS LTPSDPVEDN
AGANGGVRIA DLPQASEDPE TNAGPSIGTR VLPLTERDTT GADASSAADS SAAPFVRNSE
PANPEPGLPL MSIVLVEEEG AVGAEALEDF PYPLTFTIDP SDPDAVARMK ARRAAGFEVM
VLADLPREGQ PQDAETAMPV WFDRLPEAVG ILEGIDSGVQ GNRALADQVA SIAGDLGYGL
VLQDNGLNTV HKMALRDGIP SGVVFRDFDG AGQDPRAMRR FLDQAAFRSG QEGAVIMLGR
LKPDTISALL IWGLQDRASS VALVPISTSL KRLLEPVSN
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