| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1797 |
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| Symbol | |
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| ID | 5712785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1868767 |
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| End bp | 1870593 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641267717 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533140 |
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| Protein GI | 159044346 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2861] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000479521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.132264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAGAG GCATACTCTC GGGCCTGTTC TGGGGCGGTG CGGCCAGCAT GATCGTGCTG
ATGGCCGCGT CGGTTTATTT TCCCCTGCGG GACATCAGCG ACCGCACCGC GCCGCGCGCG
CCGGTGCGCG AGAACGTGTT GCTCGCCGAC CCGCCCCCCC TCCCGCCGGG GGCGGAGGTG
CAGCCGAGCG TTGCGGAGCC TGAACCTTCC GTCACGACCG ATCGTGTCGC GGCCCCGTTG
CAGACCCCGC GTCCAGACAG CGGCCCGCCG CCCGATGCCC CTGCACCGGC CGCGCCGACG
GTTGCCGAGG CGCCGCCCGC GCCGCCGACG GACCCCGCCG CGCCCGCTGG CCCGGGCCCG
GAACTTGCCG AGACCGCCCC GGCGAATGTT GCGCAGCCCG CGCCCGGCCA AGCGGTCCCA
ACCGCGCCTG GGCCCGATAC CCCGTCGGCC ACCGCGCCGC GGATGGCCGA CGTGCCGCCG
GGCCTGCCGG TGCCCGGTGC CGTGCGCGAC CGCGCCCCGG GAGAGGCGCT CGCAGCCCTG
CAAACCCCTT TGCCGGTCCC CGAGGTTGCC CAGGAGCCGG GCGATTTGAC GGGCCCTGCC
GCGATCCTGC CCGCCCCCGG CGCGCGGCAA ATCGGCGAGG CGGCGACGCG GACGCCGGAC
CGGCCCGCGG ATCTGCCTGT GCCTGGCACG GCCGCCGAAC CACCGGTCGC GTCGGCGCCT
GTCGCGCCGC CCCGGCCGCC GGAGCTCGCC GCGGAGCCAT CGATGCCGTC CGGCCCGCCG
GAGCCGGTCG AGCTTGCCCG TCCCGACAGC TCGCCGCCGC GGCTGGCCCT GGCACCCGCA
GACCTGCCGC TGCCTCCCGT GGCCGCGGCC CCCATGGAAG CGTCGGAGCC GCCCGTCCCG
GCCGCAGGCC CTCTGCCCGC CGACCTGCGC CCGGCCGCCG ACACGCCTGC ACCGCCCGCC
GACGACCGGC GCACGGCCCT GGTCGTGCCG CCGCGGGAGC TGCCCCGCCG TCTGGTGCTC
GGCAGCGACC AGAGCTTCGG CACCCGCGGC CCTGGCCTGT CCTCGCGGAT CCCCCGGATC
GGCGAGACCG CCGCGGTGGC CGAGGCCGAC GATCCCCTGA CGCCAGAGCC GGAGGTGCCC
GCGCCGCTTG GTGCCCTGGC CCGAAATGCG CTGCCTTTCG AAGGGGCGGA GGGTGTGCCG
CGGCTCGCCC TGGTGCTGCG CGCGACCTCT GACGCGCGGG CGATCACCGA TGTGCTGAGC
CGGATCGCCG ATCCCGTGGC CGTGGCGCTC GACCCGACAT GGCCGGAGGC GGATGCGCGC
GCGGCCGAGC TGCGCGCGGC GGGGCACGAG GTGCTGATCA CCCTGACGGG GCTACCCGAC
CCGGTCGAGC CGCGCGACAT CGATACCGCC CTCGCGGTCC ATATCGCGCG CCTGCCGGGC
GCGATGGGGG TCTGGCTGCC CCGGACGAGC CCGGTCTTCG GCGATCGGGA ACTGCTGCGC
CACCTGGTGG CGGTGTTGGG CGACACGGGC CACGGGCTGG TGGCGCCGCT CAGCGGGCTC
GACGCGGTGG GGCAGGAGGC GCGGGCGATC GGTCTGCCCG CGATTTCGGT GGGCCGGGTC
CTTGGCGGGT CCGGAGAGGG TGAGGACGCC CTGCGCAGAA GCCTCGACCA GGGGGCGTTG
CGCGCCGGCG CGGACGGGCA GGCGGTCCTG CTGGGCGAGA CCCGGGCCGA GACGCTGTCG
GCCCTGCGCG ACTGGAGCGC CGCGCAGGAC CCGGATGCCT TGCGCCTTGC ACCGATCTCC
GCGCTTTTGC TGGCCCCGGG GTCCTAG
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| Protein sequence | MGRGILSGLF WGGAASMIVL MAASVYFPLR DISDRTAPRA PVRENVLLAD PPPLPPGAEV
QPSVAEPEPS VTTDRVAAPL QTPRPDSGPP PDAPAPAAPT VAEAPPAPPT DPAAPAGPGP
ELAETAPANV AQPAPGQAVP TAPGPDTPSA TAPRMADVPP GLPVPGAVRD RAPGEALAAL
QTPLPVPEVA QEPGDLTGPA AILPAPGARQ IGEAATRTPD RPADLPVPGT AAEPPVASAP
VAPPRPPELA AEPSMPSGPP EPVELARPDS SPPRLALAPA DLPLPPVAAA PMEASEPPVP
AAGPLPADLR PAADTPAPPA DDRRTALVVP PRELPRRLVL GSDQSFGTRG PGLSSRIPRI
GETAAVAEAD DPLTPEPEVP APLGALARNA LPFEGAEGVP RLALVLRATS DARAITDVLS
RIADPVAVAL DPTWPEADAR AAELRAAGHE VLITLTGLPD PVEPRDIDTA LAVHIARLPG
AMGVWLPRTS PVFGDRELLR HLVAVLGDTG HGLVAPLSGL DAVGQEARAI GLPAISVGRV
LGGSGEGEDA LRRSLDQGAL RAGADGQAVL LGETRAETLS ALRDWSAAQD PDALRLAPIS
ALLLAPGS
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