Gene Rsph17025_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3100 
Symbol 
ID5083298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp3176138 
End bp3177562 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content76% 
IMG OID640484672 
Productprotein of unknown function DUF610, YibQ 
Protein accessionYP_001169289 
Protein GI146279130 
COG category[S] Function unknown 
COG ID[COG2861] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.482239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGG GTTTCCTTTC GGGCGTGTTG ATGGGCGGCA TCGTGGGCAG CGTGGGCCTC 
GCCGTCGCCT CGCAGATGGC GCGGCCTCCG GGCACGACCT GGCCCTCCGT CAAGGCCGAG
CCCGCGACGG TGGCCGCGGA TGTCTCCTCC TCCTCGGATC GCGCCGCCGT GGCGGACGCC
GCCGGAGGAG CCGATCCGGT TCTCGTGCCG AAGGCGGCCA GGGCCGTGCC CGCGGGCCCC
GCCACGGATC TCGTGCCGCC CGCCGGATCC GAGTTCGCCC GGCCTCTGCC CGACGCGCCG
CCGGTCCTGC CGGCGGCCGA CCGGGCACCG TCGCGCAGCG AGATGTTGCC CGTGGCCGTC
CCGGACGTGC CCGACACCTC GTCGCCCGAC ACCCGCACCG CTTCCCGGCC GCAGTCGGTG
CCGCTCGAAC CCGCGGTTCC GGTCGCCCCG GCGGGCGAGG CCGCAGCGCC CGCGCGTCCC
GCCACGAGCC TTGCCGCTCC GGTCCGCCTC GAGGGGACGG CGCAGCCGGG CGTGCCCGCC
GCCGAGGCCG ATCCCGCCGC GGCCGAGTTG CCGCCGCCTC CGCCCCTGAC GCCGGAAGAG
GAGGCGATGC TGGCGGAAGC CGCAGGGATC ACCGATCCCG CGCGCCCGCG GATGATCGAG
GCCGACCCGC CGCGCACGAC CGCAGACGGC TCGCGCCTGC CGCGCATCGG CGACCCGGAT
CCCACGACCC AAGTGACGGT TGCGCCCGAG ACCGACCTGC CGCCGATCCG GCGCTACGCG
CGGCCCTTCG AGAACCCGAT GCAGAAGCCG CTGTTCGCGG TTCTCCTGCG CGACACGGGC
GGGCCTGCCC TGGACCGCGA GGCGCTGGCC GGCCTGCCGT TCCCGGTGAC CTTCGTCATC
GACCCGCAGG AGCCCGGCGC GACCACCGCG GCCGCCATGT ATCGCGCGGC CGGGCACGAG
GTGCTGATGC TCGCCACCGG CCTGCCCGAA GGCGCGACGG CTGCGGACGC CGAGGTGATG
CTCGAATCCG CCGCGCTTGC GGTGCCGGAG GCGGTCGGGA TGATCGACCT GCCTTCGGGC
GGCTTTCAGG AGGCCCGGAC GCTGGCGACG CAGGTCGTCG GCATCCTCGA GGCGCAGGGC
CGGGGGCTCG TGACCCACGA CCGCGGCCTC AACGCCGCCG ATCAGGTGGC CCGGCGCCAG
AGCCTCCCGG CAGCGGTCGT GTTCCGCAGC CTCGATGCCG AGGGGGCAAA CGCGGCCGAG
ATCCGCCGCG TGCTCGACCG TGCCGCCTTC AAGGCGGCGC AGGAGGGCCG GGTGGCGGTC
TATGGCGACA CAAGGCCCGA GACGGTGCAG GGCCTGCTGG AATGGACGGT CGAGGGGCGG
GCGGATGCGG TGGCGCTGGC GCCGGTCACC GCCCTGATGC GGTAA
 
Protein sequence
MSRGFLSGVL MGGIVGSVGL AVASQMARPP GTTWPSVKAE PATVAADVSS SSDRAAVADA 
AGGADPVLVP KAARAVPAGP ATDLVPPAGS EFARPLPDAP PVLPAADRAP SRSEMLPVAV
PDVPDTSSPD TRTASRPQSV PLEPAVPVAP AGEAAAPARP ATSLAAPVRL EGTAQPGVPA
AEADPAAAEL PPPPPLTPEE EAMLAEAAGI TDPARPRMIE ADPPRTTADG SRLPRIGDPD
PTTQVTVAPE TDLPPIRRYA RPFENPMQKP LFAVLLRDTG GPALDREALA GLPFPVTFVI
DPQEPGATTA AAMYRAAGHE VLMLATGLPE GATAADAEVM LESAALAVPE AVGMIDLPSG
GFQEARTLAT QVVGILEAQG RGLVTHDRGL NAADQVARRQ SLPAAVVFRS LDAEGANAAE
IRRVLDRAAF KAAQEGRVAV YGDTRPETVQ GLLEWTVEGR ADAVALAPVT ALMR