17 homologs were found in PanDaTox collection
for query gene TK90_2333 on replicon NC_013889
Organism: Thioalkalivibrio sp. K90mix



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013889  TK90_2333  hypothetical protein  100 
 
 
121 aa  243  8e-64  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_0709  hypothetical protein  38.74 
 
 
216 aa  85.5  3e-16  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.0000762305  n/a   
 
 
-
 
NC_009675  Anae109_0899  hypothetical protein  42.72 
 
 
283 aa  82.4  0.000000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.202304  normal  0.941783 
 
 
-
 
NC_007760  Adeh_0837  hypothetical protein  41.24 
 
 
270 aa  81.3  0.000000000000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0883  hypothetical protein  41.24 
 
 
270 aa  80.9  0.000000000000006  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0887  hypothetical protein  41.24 
 
 
271 aa  80.9  0.000000000000006  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.817518  n/a   
 
 
-
 
NC_008576  Mmc1_2522  hypothetical protein  43.96 
 
 
126 aa  80.1  0.000000000000009  Magnetococcus sp. MC-1  Bacteria  normal  0.963067  normal  0.122207 
 
 
-
 
NC_012918  GM21_1481  nucleic acid binding, OB-fold, tRNA/helicase-type  43.48 
 
 
258 aa  79.7  0.00000000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000462109 
 
 
-
 
NC_007517  Gmet_0110  nucleic acid binding, OB-fold, tRNA/helicase-type  43 
 
 
242 aa  80.1  0.00000000000001  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.0000245323  normal 
 
 
-
 
NC_002939  GSU0317  hypothetical protein  40.43 
 
 
243 aa  76.3  0.0000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.309994  n/a   
 
 
-
 
NC_011146  Gbem_1133  nucleic acid binding, OB-fold, tRNA/helicase-type  36.96 
 
 
243 aa  74.3  0.0000000000005  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00000171522  n/a   
 
 
-
 
NC_011146  Gbem_1103  nucleic acid binding OB-fold tRNA/helicase-type  34.02 
 
 
133 aa  73.2  0.000000000001  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000000179388  n/a   
 
 
-
 
NC_009483  Gura_0667  nucleic acid binding, OB-fold, tRNA/helicase-type  50 
 
 
274 aa  66.6  0.0000000001  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000000588862  n/a   
 
 
-
 
NC_012918  GM21_0582  nucleic acid binding, OB-fold, tRNA/helicase-type  46.97 
 
 
270 aa  65.5  0.0000000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00229722 
 
 
-
 
NC_011146  Gbem_0569  nucleic acid binding, OB-fold, tRNA/helicase-type  45.45 
 
 
277 aa  62.8  0.000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3669  nucleic acid binding, OB-fold, tRNA/helicase-type  40.43 
 
 
237 aa  60.5  0.000000007  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0029  nucleic acid binding, OB-fold, tRNA/helicase-type  43.55 
 
 
256 aa  58.9  0.00000002  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00147901  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>