17 homologs were found in PanDaTox collection
for query gene Gbem_1103 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011146  Gbem_1103  nucleic acid binding OB-fold tRNA/helicase-type  100 
 
 		 133 aa  265  2e-70  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000000179388  n/a   
 
 
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NC_007517  Gmet_0110  nucleic acid binding, OB-fold, tRNA/helicase-type  50.96 
 
 		 242 aa  117  4.9999999999999996e-26  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.0000245323  normal  1 
 
 
-
 
NC_002939  GSU0317  hypothetical protein  49.52 
 
 		 243 aa  112  1.0000000000000001e-24  Geobacter sulfurreducens PCA  Bacteria  normal  0.309994  n/a   
 
 
-
 
NC_007760  Adeh_0837  hypothetical protein  54.9 
 
 		 270 aa  110  5e-24  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_0883  hypothetical protein  54.9 
 
 		 270 aa  109  1.0000000000000001e-23  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_0887  hypothetical protein  54.9 
 
 		 271 aa  109  1.0000000000000001e-23  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.817518  n/a   
 
 
-
 
NC_011146  Gbem_1133  nucleic acid binding, OB-fold, tRNA/helicase-type  48.08 
 
 		 243 aa  109  1.0000000000000001e-23  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00000171522  n/a   
 
 
-
 
NC_009675  Anae109_0899  hypothetical protein  52.94 
 
 		 283 aa  109  1.0000000000000001e-23  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.202304  normal  0.941783 
 
 
-
 
NC_009483  Gura_0667  nucleic acid binding, OB-fold, tRNA/helicase-type  56.73 
 
 		 274 aa  100  5e-21  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000000588862  n/a   
 
 
-
 
NC_012918  GM21_0582  nucleic acid binding, OB-fold, tRNA/helicase-type  51.92 
 
 		 270 aa  98.2  3e-20  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00229722 
 
 
-
 
NC_012918  GM21_1481  nucleic acid binding, OB-fold, tRNA/helicase-type  44.79 
 
 		 258 aa  95.1  2e-19  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000462109 
 
 
-
 
NC_011146  Gbem_0569  nucleic acid binding, OB-fold, tRNA/helicase-type  51.46 
 
 		 277 aa  94.4  5e-19  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_013512  Sdel_0709  hypothetical protein  44.68 
 
 		 216 aa  90.1  8e-18  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.0000762305  n/a   
 
 
-
 
NC_008576  Mmc1_2522  hypothetical protein  42.55 
 
 		 126 aa  89.7  1e-17  Magnetococcus sp. MC-1  Bacteria  normal  0.963067  normal  0.122207 
 
 
-
 
NC_009483  Gura_0029  nucleic acid binding, OB-fold, tRNA/helicase-type  53.62 
 
 		 256 aa  78.2  0.00000000000004  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00147901  n/a   
 
 
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NC_007908  Rfer_3669  nucleic acid binding, OB-fold, tRNA/helicase-type  45.1 
 
 		 237 aa  76.3  0.0000000000001  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013889  TK90_2333  hypothetical protein  34.02 
 
 		 121 aa  73.2  0.000000000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  1  normal  1 
 
 
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